PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027335700.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 594aa    MW: 66219.8 Da    PI: 4.8292
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027335700.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS450.11.4e-1372215912374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lL+ecA a+s+g+ e+ +++++ l++++s +g+p qR+aay++e+Laarla+s++++ykal+++e +   ss++laa+++++ev+P++kf+++
  XP_027335700.1 221 KQLLYECAIALSEGNEEEGSSMINGLRQMVSIQGEPSQRIAAYMVEGLAARLAESGKSIYKALKCKEPP---SSDRLAAMQILFEVCPCFKFGFV 312
                     589*****************************************************************9...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     +aN+aI eav+ + ++HiiDfdi+qG Q+++L+qaLasR+++pp++R+Tgv++pes+  s   l+ +g rL+++A+elg+pfef++ va++++ +
  XP_027335700.1 313 AANNAITEAVKDDMKIHIIDFDINQGSQYINLIQALASRSSKPPHVRLTGVDDPESVqrSVGGLQIIGLRLEELAKELGLPFEFRA-VASKTSIV 406
                     *******************************************************9999999************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     ++++L+++pgEal+Vn+++qlh+++desvs+ +erd++L++vksl+Pk+v+vveq++++n+++Fl rf+ea  yysa+f+sl+++lpres++r++
  XP_027335700.1 407 TPSMLNCRPGEALVVNFAFQLHHMPDESVSTVNERDQLLRMVKSLNPKLVTVVEQDVNTNTTPFLPRFVEAYTYYSAVFESLDVTLPRESQDRMN 501
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     vEr++l+r+ivnvvaceg++r+er e ++kWr+r+++aGF++ p+s +++++++ l++ ++ d y+++ee ++l +gW+d++L+++SaW+
  XP_027335700.1 502 VERQCLARDIVNVVACEGKDRIERYEVAGKWRARMTMAGFTSSPMSANVTNEIQKLIKVMYCDRYKIKEEMDALHFGWEDKNLIVASAWK 591
                     *************************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 594 aa     Download sequence    
MSLVRSAEVA PTSYQNAKLY SLKEQGVRPG LCSQIFGPDK HRNMYMTNTY SGKSYEKYFL  60
DSQTEELIEP SCSGISGSSI HPDGASSYHL RSSSGTFMAA NNPFGTSFMS TRHHDAYPSN  120
LGSDLMENSS LDSRNNDDLM KLKLQALERA LLDDSDAEEE EEEDIFGTAQ SMEIDPEIAG  180
WADSMQNMLL HDSPKEYSSS DSNISSISST KEITQTSQTP KQLLYECAIA LSEGNEEEGS  240
SMINGLRQMV SIQGEPSQRI AAYMVEGLAA RLAESGKSIY KALKCKEPPS SDRLAAMQIL  300
FEVCPCFKFG FVAANNAITE AVKDDMKIHI IDFDINQGSQ YINLIQALAS RSSKPPHVRL  360
TGVDDPESVQ RSVGGLQIIG LRLEELAKEL GLPFEFRAVA SKTSIVTPSM LNCRPGEALV  420
VNFAFQLHHM PDESVSTVNE RDQLLRMVKS LNPKLVTVVE QDVNTNTTPF LPRFVEAYTY  480
YSAVFESLDV TLPRESQDRM NVERQCLARD IVNVVACEGK DRIERYEVAG KWRARMTMAG  540
FTSSPMSANV TNEIQKLIKV MYCDRYKIKE EMDALHFGWE DKNLIVASAW KLPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein