PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335647.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 476aa MW: 51375 Da PI: 7.776

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335647.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48.8	1.2e-15	301	346	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRd+iN+++ +L++l+P++ K +Ka++L +++eY+k+Lq XP_027335647.1 301 HNQSERKRRDKINQRMKTLQKLVPNS-----SKTDKASMLDEVIEYLKQLQ 346 9**********************8.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MSQCVPSWDV DDNPPPPRVS LRSNSNSTAP DVPMLDYDVA ELTWENGQLS MHGLGLPRVP 60 LKPSTTTNNK YTWEKPRASG TLESIVNQAT SLPERGKDGS AAGANTEGGY GNLLVPWFDP 120 RRATAAAAAA SNNTMTMDAL VPCSNRSEEQ SNHAMDSNPR GVGTCMVDCS TRVGSCCGNH 180 GEGAVLAAAK RAKVAHVPVG GHEMSGRDQS VSGSATFGRD SKHVTLDTCD REFDMGFTST 240 SIGSLENTSS AKQCTKTTTV DEHDSVSHSK PVREDGDEEK KKKGNEKSSV STKRSRAAAI 300 HNQSERKRRD KINQRMKTLQ KLVPNSSKTD KASMLDEVIE YLKQLQAQVQ MMNRINMSSM 360 ILPLTMQQQL QMSMMSPMGI GMGMGMGMGM GMDMNSLNRA NIPGIPPVLH PSAFMPMPAW 420 DAAAGDRLQG TPATVMPDPL STFFGCQSQP MTMDAYSRIA AMYQQLHQPH GSGSKN

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MSQCVPSWDV DDNPPPPRVS LRSNSNSTAP DVPMLDYDVA ELTWENGQLS MHGLGLPRVP  60
LKPSTTTNNK YTWEKPRASG TLESIVNQAT SLPERGKDGS AAGANTEGGY GNLLVPWFDP  120
RRATAAAAAA SNNTMTMDAL VPCSNRSEEQ SNHAMDSNPR GVGTCMVDCS TRVGSCCGNH  180
GEGAVLAAAK RAKVAHVPVG GHEMSGRDQS VSGSATFGRD SKHVTLDTCD REFDMGFTST  240
SIGSLENTSS AKQCTKTTTV DEHDSVSHSK PVREDGDEEK KKKGNEKSSV STKRSRAAAI  300
HNQSERKRRD KINQRMKTLQ KLVPNSSKTD KASMLDEVIE YLKQLQAQVQ MMNRINMSSM  360
ILPLTMQQQL QMSMMSPMGI GMGMGMGMGM GMDMNSLNRA NIPGIPPVLH PSAFMPMPAW  420
DAAAGDRLQG TPATVMPDPL STFFGCQSQP MTMDAYSRIA AMYQQLHQPH GSGSKN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	305	310	ERKRRD
2	306	311	RKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	1e-105	bHLH family protein