PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027335599.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 207aa MW: 23872.2 Da PI: 8.7961 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 82.4 | 2.8e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n rqvtfskRr+g++KKA+ELS+LCdae+a+i+fs t kl+ey+s XP_027335599.1 9 KKIDNINARQVTFSKRRKGLFKKAQELSTLCDAEIALIVFSATSKLFEYAS 59 689**********************************************86 PP | |||||||
2 | K-box | 40.4 | 1.2e-14 | 81 | 170 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ ++++ + ++ L+ke+e +e+ +l Ge+L+ L++ eLq+Le+ L++ ++i + K+e +l++i++l+ ke el+eenk+L++ + XP_027335599.1 81 QCIEQQQLGSDSYDMLRKEVEDKAHELSRLNGEELQGLTIAELQKLEELLQRRWTTISKIKDEKILQEINHLKTKEAELKEENKKLKQSF 170 5566777788999**************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MTRKKIPIKK IDNINARQVT FSKRRKGLFK KAQELSTLCD AEIALIVFSA TSKLFEYASS 60 SIQQTIEKRN RHAMIQGLEN QCIEQQQLGS DSYDMLRKEV EDKAHELSRL NGEELQGLTI 120 AELQKLEELL QRRWTTISKI KDEKILQEIN HLKTKEAELK EENKKLKQSF VQEQRQSYES 180 ITCSSSDHPP DYGSSDTSLK LGLPAFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 2e-38 | MIKC_MADS family protein |