PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027335587.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 142aa    MW: 16294.9 Da    PI: 10.3892
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027335587.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF901.2e-281059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    ri+n++ rqvtfskRrng+lKKA ELS+LCdaev +i+fsstgkl++y+s
  XP_027335587.1 10 RIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGLIVFSSTGKLHDYAS 59
                    8***********************************************86 PP

2K-box66.31.1e-2281141969
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 
                     + +++ + +q+e+a L+++++ Lq+ +R+l+Ge+L+ L +keLq+Le+qLe slk +R kK
  XP_027335587.1  81 NPASEVKFWQTEAASLRQQLQYLQECHRQLMGEELSGLGIKELQNLENQLEMSLKGVRMKK 141
                     567889******************************************************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MGRGKIAIRR IDNSTSRQVT FSKRRNGLLK KARELSILCD AEVGLIVFSS TGKLHDYAST  60
SMKSVIERFN KLKEEQHQLM NPASEVKFWQ TEAASLRQQL QYLQECHRQL MGEELSGLGI  120
KELQNLENQL EMSLKGVRMK KV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.13e-77MIKC_MADS family protein