PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027335587.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 142aa MW: 16294.9 Da PI: 10.3892 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90 | 1.2e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA ELS+LCdaev +i+fsstgkl++y+s XP_027335587.1 10 RIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGLIVFSSTGKLHDYAS 59 8***********************************************86 PP | |||||||
2 | K-box | 66.3 | 1.1e-22 | 81 | 141 | 9 | 69 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 + +++ + +q+e+a L+++++ Lq+ +R+l+Ge+L+ L +keLq+Le+qLe slk +R kK XP_027335587.1 81 NPASEVKFWQTEAASLRQQLQYLQECHRQLMGEELSGLGIKELQNLENQLEMSLKGVRMKK 141 567889******************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
MGRGKIAIRR IDNSTSRQVT FSKRRNGLLK KARELSILCD AEVGLIVFSS TGKLHDYAST 60 SMKSVIERFN KLKEEQHQLM NPASEVKFWQ TEAASLRQQL QYLQECHRQL MGEELSGLGI 120 KELQNLENQL EMSLKGVRMK KV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 3e-77 | MIKC_MADS family protein |