PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335465.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

NF-X1

Protein Properties

Length: 865aa MW: 96576.4 Da PI: 8.4046

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335465.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	18.1	5.8e-06	186	204	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG H+C lCH+GpCp+Cp+ XP_027335465.1 186 CG-HRCLLLCHPGPCPSCPK 204 .*************96 PP
2	zf-NF-X1	21.4	5.5e-07	238	256	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG H+C + CH+GpCppC+ XP_027335465.1 238 CGVHRCVEVCHRGPCPPCR 256 ******************7 PP
3	zf-NF-X1	16.7	1.6e-05	398	417	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG+H C++ C+ G+CppC++ XP_027335465.1 398 CGRHECKRRCCDGDCPPCSE 417 ******************85 PP
4	zf-NF-X1	18.3	4.9e-06	419	443	1	19
zf-NF-X1 1 CG......kHkCqklCHeGpCppCp 19 CG +HkC ++CH+GpC pCp XP_027335465.1 419 CGrrlrckNHKCPSPCHRGPCAPCP 443 777777779***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 865 aa Download sequence
MTSLNHRPPP PSPLSDSDSD GGSSTAETLR HSDLSDSIFK SYFDFSGHSS ATAGDLSKIQ 60 SFLTSSSAGA LSCLICLERI KPSDPTWSCS SLCFAVFHLI CIQSWARQAS DLAAARAATR 120 LPISPDKASD TAIWNCPKCR VEYPKTHIPK AYLCFCGKLE NPPSDDPWVL PHSCGDVCGR 180 PLKHNCGHRC LLLCHPGPCP SCPKLVKVRC FCGSLEDVRR CGFKDFSCNS PCSKVLDCGV 240 HRCVEVCHRG PCPPCRTRGV HACQCGKIKE EKECCDRVFQ CGYPCEKRLS CGKHVCERGC 300 HSGECGECPL QGKRTCPCGS RVYEGMSCDA PVQLCGATCN KMLPCGYHRC HERCHRGQCI 360 ETCRIVVKKS CRCGSLKKDV PCYQDLACER KCKRMRDCGR HECKRRCCDG DCPPCSEICG 420 RRLRCKNHKC PSPCHRGPCA PCPIMVTISC ACGETHFEVP CGTEMDQKPP RCPKLCPITP 480 LCRHASNCKP HKCHYGACPP CRLPCAEEYQ CGHTCKLRCH GAKPPPNPEY TLKPKKKKIL 540 QQRETVPGTP CPPCPELVWR SCVGQHIGTE KMMVCSHKSR FSCENLCGNP LPCGNHYCTK 600 TCHALVNQLQ GSEPCEDCYL PCQKEREPTC PHPCPQPCHP GDCPPCKVLI KRSCHCSAMV 660 HVFECIYYNT LSVKSQETVR SCSGPCHRKL PNCTHLCPET CHPGQCPKPE KCSKKVTVRC 720 KCQTLKKEWL CQDVQAAYHD AGCHPRDIPK SQFGVGLIPC NSDCKSRVQV VESEIQFRKS 780 RVTEVKEADK EKSVSKRRKR RERVLESKET TKLQKIISRT KQLLLFTLIL VIVVVATYYG 840 YKGLLRLSDW MNEVDERRQR YSRIK

Sequence ? help Back to Top

Protein Sequence Length: 865 aa Download sequence

MTSLNHRPPP PSPLSDSDSD GGSSTAETLR HSDLSDSIFK SYFDFSGHSS ATAGDLSKIQ  60
SFLTSSSAGA LSCLICLERI KPSDPTWSCS SLCFAVFHLI CIQSWARQAS DLAAARAATR  120
LPISPDKASD TAIWNCPKCR VEYPKTHIPK AYLCFCGKLE NPPSDDPWVL PHSCGDVCGR  180
PLKHNCGHRC LLLCHPGPCP SCPKLVKVRC FCGSLEDVRR CGFKDFSCNS PCSKVLDCGV  240
HRCVEVCHRG PCPPCRTRGV HACQCGKIKE EKECCDRVFQ CGYPCEKRLS CGKHVCERGC  300
HSGECGECPL QGKRTCPCGS RVYEGMSCDA PVQLCGATCN KMLPCGYHRC HERCHRGQCI  360
ETCRIVVKKS CRCGSLKKDV PCYQDLACER KCKRMRDCGR HECKRRCCDG DCPPCSEICG  420
RRLRCKNHKC PSPCHRGPCA PCPIMVTISC ACGETHFEVP CGTEMDQKPP RCPKLCPITP  480
LCRHASNCKP HKCHYGACPP CRLPCAEEYQ CGHTCKLRCH GAKPPPNPEY TLKPKKKKIL  540
QQRETVPGTP CPPCPELVWR SCVGQHIGTE KMMVCSHKSR FSCENLCGNP LPCGNHYCTK  600
TCHALVNQLQ GSEPCEDCYL PCQKEREPTC PHPCPQPCHP GDCPPCKVLI KRSCHCSAMV  660
HVFECIYYNT LSVKSQETVR SCSGPCHRKL PNCTHLCPET CHPGQCPKPE KCSKKVTVRC  720
KCQTLKKEWL CQDVQAAYHD AGCHPRDIPK SQFGVGLIPC NSDCKSRVQV VESEIQFRKS  780
RVTEVKEADK EKSVSKRRKR RERVLESKET TKLQKIISRT KQLLLFTLIL VIVVVATYYG  840
YKGLLRLSDW MNEVDERRQR YSRIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05660.1	0.0	NF-X1 family protein