PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027335068.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 209aa MW: 24728.4 Da PI: 10.1405 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96.7 | 1e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++ rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss XP_027335068.1 9 KRIENETSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSTRGKLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 65.6 | 1.7e-22 | 85 | 172 | 12 | 99 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++++ + + k++e L+ ++R+llGe+L+++sl eLqqLe+qLe+sl+kiR++Kn+l+++ ie+l++ ek l eenk+Lr++ + XP_027335068.1 85 ENTQHVKDGDISMVKKLEHLEVSKRKLLGEELDTCSLDELQQLENQLERSLNKIRARKNQLFRQRIEKLKEEEKFLLEENKRLRQQCQ 172 4566666666678899*********************************************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MVRGKTQMKR IENETSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFST RGKLYEFSSS 60 SINKTVERYQ RKIKDLGLST KGIQENTQHV KDGDISMVKK LEHLEVSKRK LLGEELDTCS 120 LDELQQLENQ LERSLNKIRA RKNQLFRQRI EKLKEEEKFL LEENKRLRQQ CQIERQRSFS 180 IQDVELVTEK RGEEVETELF IGRPERRMP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11880.1 | 2e-63 | MIKC_MADS family protein |