PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335038.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 655aa MW: 72813.8 Da PI: 6.5959

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335038.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.2	1.8e-08	549	597	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v q G+g+W+ I r Rt ++k++w+++l XP_027335038.1 549 AWTLVEVMKLVEGVSQCGPGRWSEIKRLSFsshSYRTSVDLKDKWRNLL 597 7*************************99999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
METVVGIEDN DDGKLEDSGV DRSSSAVSSP KQIANPVVYK LVRVEGDGRL VPATDDEVME 60 VEDFLEYENS EMRVVADTGQ SLECISIERS SSGKLRLECS EGTAEADLGK LNAKFQYIEQ 120 MLQKVKEEEK LRLSCGSPVH SHVNIDSQCS ADKFPIMDGK AQSETPYQEI PSIASSLNYS 180 HSNQSGSIDQ CSRPSEGVIE SGSSASAVYY NLKPDFSMVD GEICLDKLSI RELHELFKVT 240 FGRQTTVKDK QWLKRRIAMS LTNSCDVSAT TFIVKDNKIV RKCEEDSSKN MNAASLISSE 300 NMAEEEDVNF NDSSAVKGCG IEDNLVVSET RLRNHNTEHG LGHENHQIEE RAAKRIRKPT 360 KRYIEELSEH EFREHSPRSL ISNKNMGLGH VSPTSYVRPS RNAFSDGRTF ITRLDSLGGS 420 DVLIPCASRD QRSRPRKNIT SLMKFHPTGM GEAAKLGNKL LGEHGFDAGS EIQDKVLKSR 480 MPAKFHQPVR PTYPLLMVER SACEPAKETI ELWQELRPEK ADPSSHTSDD NIVTVPTAKG 540 GMRRKHHRAW TLVEVMKLVE GVSQCGPGRW SEIKRLSFSS HSYRTSVDLK DKWRNLLKAS 600 FADDGINARK HGTVMIPETI LVRVRELAEM NSQVPPSKLT GGAGNVHGGD RSGYL

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

METVVGIEDN DDGKLEDSGV DRSSSAVSSP KQIANPVVYK LVRVEGDGRL VPATDDEVME  60
VEDFLEYENS EMRVVADTGQ SLECISIERS SSGKLRLECS EGTAEADLGK LNAKFQYIEQ  120
MLQKVKEEEK LRLSCGSPVH SHVNIDSQCS ADKFPIMDGK AQSETPYQEI PSIASSLNYS  180
HSNQSGSIDQ CSRPSEGVIE SGSSASAVYY NLKPDFSMVD GEICLDKLSI RELHELFKVT  240
FGRQTTVKDK QWLKRRIAMS LTNSCDVSAT TFIVKDNKIV RKCEEDSSKN MNAASLISSE  300
NMAEEEDVNF NDSSAVKGCG IEDNLVVSET RLRNHNTEHG LGHENHQIEE RAAKRIRKPT  360
KRYIEELSEH EFREHSPRSL ISNKNMGLGH VSPTSYVRPS RNAFSDGRTF ITRLDSLGGS  420
DVLIPCASRD QRSRPRKNIT SLMKFHPTGM GEAAKLGNKL LGEHGFDAGS EIQDKVLKSR  480
MPAKFHQPVR PTYPLLMVER SACEPAKETI ELWQELRPEK ADPSSHTSDD NIVTVPTAKG  540
GMRRKHHRAW TLVEVMKLVE GVSQCGPGRW SEIKRLSFSS HSYRTSVDLK DKWRNLLKAS  600
FADDGINARK HGTVMIPETI LVRVRELAEM NSQVPPSKLT GGAGNVHGGD RSGYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	1e-123	MYB_related family protein