PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027334800.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 218aa MW: 24972.5 Da PI: 10.1036 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96.2 | 1.4e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_027334800.1 9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 59 79***********************************************86 PP | |||||||
2 | K-box | 91 | 2.1e-30 | 83 | 172 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 e+++++l+qe+a++ k+i+ L+ ++R+l+Ge+L+s+s+ eLq++eqqLe+sl+++R++K+++++eq+e+l++kek+l +en +L++k XP_027334800.1 83 SIEQNMQYLKQEAANMMKKIDLLEASKRKLMGEGLGSCSIDELQRMEQQLERSLSNVRARKTQFFREQVEQLKEKEKALVDENARLSEKC 172 45899*********************************************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MVRGKTQMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFASS 60 SMQGSIERYR RHTKDNNPAT LRSIEQNMQY LKQEAANMMK KIDLLEASKR KLMGEGLGSC 120 SIDELQRMEQ QLERSLSNVR ARKTQFFREQ VEQLKEKEKA LVDENARLSE KCGMQSQPAT 180 RGENQPQSYT ESSPSSDVET ELFIGLPDTR TKRIPTQA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 8e-97 | MIKC_MADS family protein |