PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027334132.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 868aa MW: 96836.5 Da PI: 8.7218

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027334132.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	62.2	1.3e-19	776	856	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++ev++Li +r e+++r++ k +++lWee+s+++ + g++rsp qCk+ w +l ++y+++k+ +k++ +++py+++++ XP_027334132.1 776 KWKHEEVKKLIGMRGELNDRFQVVKGRMALWEEISQNLLADGISRSPGQCKSLWTSLLQKYEEVKNEKKSK-----KKWPYLEDMK 856 7**************************************************************999984.....68****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 868 aa Download sequence
MATCTFLSLC PHAFCCRHRP YPTRRSLTCS FSSSVLSDTD GSKVLRKRSR KIEGPKKSME 60 DSVQRKMEEF YEGRDGPPLR VLPIGGLGEI GMNCMLVGNY DRYILIDAGV MFPDYDELGV 120 QKIIPDTTFI RKWSHKIEAV VITHGHEDHI GALPWVIPAL DSRTPIFASS FTMELIRKRL 180 KDHGIFVPSR LKVFRTRKKF VAGPFEIEPI TVTHSIPDCC GLVLRCSDGT ILHTGDWKID 240 ETPLDGKVFD REALEELSKE GVTLMMSDST NVLSPGRTIS ESLVADALLR HISAAKGRVI 300 TTQFASNIHR LGSVKAAADL TGRKLVFVGM SLRTYLDAAW KDGKAPIDPS TLVKAEDIDA 360 YAPKDLLIVT TGSQAEPRAA LNLASYGSSH SFKLTKEDIV LYSAKVIPGN ESRVMEMLNR 420 ISEIGSTIVM GKNECLHTSG HGYRGELEEV LRIVKPQHFL PIHGELLFLK EHELLGKSTG 480 IRHTTVIKNG EMLGVSHLRN RRVLSNGFIS LGKENLQLMY SDGDKAFGTS GELFIDERMR 540 IALDGIIVVS MEISRPKNLD SPFENTLKGK LRITTRCLWL DKGKLLDALH KAAHAALSSC 600 PVNCPLAHME RIVSEVLRKM VRKYSGKRPE VIVIALENPA AVLANEINTR LSGKPLVGGV 660 STLRKVADGH RKENQRTKMQ TRDQIDMDGL LPTDDAAVST GVEDDLSDAE DSDEFWKTFV 720 ESSPVEKSIK ANNGYVARKE QSSQLKIDDS EDAEECSFVE TSNSKAKSSK LAKRNKWKHE 780 EVKKLIGMRG ELNDRFQVVK GRMALWEEIS QNLLADGISR SPGQCKSLWT SLLQKYEEVK 840 NEKKSKKKWP YLEDMKRILP DNEALATK

Sequence ? help Back to Top

Protein Sequence Length: 868 aa Download sequence

MATCTFLSLC PHAFCCRHRP YPTRRSLTCS FSSSVLSDTD GSKVLRKRSR KIEGPKKSME  60
DSVQRKMEEF YEGRDGPPLR VLPIGGLGEI GMNCMLVGNY DRYILIDAGV MFPDYDELGV  120
QKIIPDTTFI RKWSHKIEAV VITHGHEDHI GALPWVIPAL DSRTPIFASS FTMELIRKRL  180
KDHGIFVPSR LKVFRTRKKF VAGPFEIEPI TVTHSIPDCC GLVLRCSDGT ILHTGDWKID  240
ETPLDGKVFD REALEELSKE GVTLMMSDST NVLSPGRTIS ESLVADALLR HISAAKGRVI  300
TTQFASNIHR LGSVKAAADL TGRKLVFVGM SLRTYLDAAW KDGKAPIDPS TLVKAEDIDA  360
YAPKDLLIVT TGSQAEPRAA LNLASYGSSH SFKLTKEDIV LYSAKVIPGN ESRVMEMLNR  420
ISEIGSTIVM GKNECLHTSG HGYRGELEEV LRIVKPQHFL PIHGELLFLK EHELLGKSTG  480
IRHTTVIKNG EMLGVSHLRN RRVLSNGFIS LGKENLQLMY SDGDKAFGTS GELFIDERMR  540
IALDGIIVVS MEISRPKNLD SPFENTLKGK LRITTRCLWL DKGKLLDALH KAAHAALSSC  600
PVNCPLAHME RIVSEVLRKM VRKYSGKRPE VIVIALENPA AVLANEINTR LSGKPLVGGV  660
STLRKVADGH RKENQRTKMQ TRDQIDMDGL LPTDDAAVST GVEDDLSDAE DSDEFWKTFV  720
ESSPVEKSIK ANNGYVARKE QSSQLKIDDS EDAEECSFVE TSNSKAKSSK LAKRNKWKHE  780
EVKKLIGMRG ELNDRFQVVK GRMALWEEIS QNLLADGISR SPGQCKSLWT SLLQKYEEVK  840
NEKKSKKKWP YLEDMKRILP DNEALATK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein