PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027334104.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | FAR1 | ||||||||
Protein Properties | Length: 178aa MW: 21241.4 Da PI: 9.7449 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 82.4 | 7.5e-26 | 12 | 100 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYA++ GF vr ++ ++s+ +++i++r+f C+k+g++ + ++ + +++r++ r gC+a++ vk +k +kw++tk+++eHnH+l+ XP_027334104.1 12 FYDEYARREGFIVRLDRCHRSELDNRIISRRFSCNKQGFHVRGRNGIKPVHKPRTSIREGCEAMMLVKFNKCEKWVITKFVKEHNHPLN 100 *******************************************99999***************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MEFVSEEAAK HFYDEYARRE GFIVRLDRCH RSELDNRIIS RRFSCNKQGF HVRGRNGIKP 60 VHKPRTSIRE GCEAMMLVKF NKCEKWVITK FVKEHNHPLN ASGLPAYNRL MESKDRKILQ 120 LTKELEQRDR LCQQYRRLLL SLMETVEEQT ECLSRKVEHV VNNVRQLQNE VQKPLNTD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 4e-54 | FAR1 family protein |