PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027333891.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 359aa MW: 39092.4 Da PI: 8.2563

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027333891.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48.5	1.6e-15	191	236	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRdriN+++ L++l+P+a K +Ka++L ++++Y+k+Lq XP_027333891.1 191 HNQSERKRRDRINQKMKALQRLVPNA-----SKTDKASMLDEVINYLKQLQ 236 9**********************9.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MSNYEEVAEL IWENGHVSMH GLGGLQHTSG EKPILGGAHD TLESIVKQAT WQQHYEPGKW 60 VGEGHAPHSI NSIAASSGEH GAVPTLSRRR AWSNTDYRGT KFGSKNANVN VLEECDVHSG 120 CASAAATFCR DNDTTMITSP SLQSAPSLKT VEEDSACHCG SDIRDNQDDR DSKAETGQTN 180 SKRRSRTAAI HNQSERKRRD RINQKMKALQ RLVPNASKTD KASMLDEVIN YLKQLQAQIQ 240 MMNMTSMPQM MVPLAMQQQL QMSMLARMGA GLGMGMGMVN INNMGTHTTA PRPLIPQLIQ 300 PTTIGANPTL PMFVAPSFMM PSLIQPHAPA PPKPQLAASS ASNIPSIPLP HPYNPSLTQ

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MSNYEEVAEL IWENGHVSMH GLGGLQHTSG EKPILGGAHD TLESIVKQAT WQQHYEPGKW  60
VGEGHAPHSI NSIAASSGEH GAVPTLSRRR AWSNTDYRGT KFGSKNANVN VLEECDVHSG  120
CASAAATFCR DNDTTMITSP SLQSAPSLKT VEEDSACHCG SDIRDNQDDR DSKAETGQTN  180
SKRRSRTAAI HNQSERKRRD RINQKMKALQ RLVPNASKTD KASMLDEVIN YLKQLQAQIQ  240
MMNMTSMPQM MVPLAMQQQL QMSMLARMGA GLGMGMGMVN INNMGTHTTA PRPLIPQLIQ  300
PTTIGANPTL PMFVAPSFMM PSLIQPHAPA PPKPQLAASS ASNIPSIPLP HPYNPSLTQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	182	199	KRRSRTAAIHNQSERKRR
2	195	200	ERKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	8e-39	bHLH family protein