PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027333885.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 378aa MW: 41264.8 Da PI: 9.4654

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027333885.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48.4	1.7e-15	173	218	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRdriN+++ L++l+P+a K +Ka++L ++++Y+k+Lq XP_027333885.1 173 HNQSERKRRDRINQKMKALQRLVPNA-----SKTDKASMLDEVINYLKQLQ 218 9**********************9.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MHGLGGLQHT SGEKPILGGA HDTLESIVKQ ATWQQHYEPG KWVGEGHAPH SINSIAASSG 60 EHGAVPTLSR RRAWSNTDYR GTKFGSKNAN VNVLEECDVH SGCASAAATF CRDNDTTMIT 120 SPSLQSAPSL KTVEEDSACH CGSDIRDNQD DRDSKAETGQ TNSKRRSRTA AIHNQSERKR 180 RDRINQKMKA LQRLVPNASK TDKASMLDEV INYLKQLQAQ IQMMNMTSMP QMMVPLAMQQ 240 QLQMSMLARM GAGLGMGMGM VNINNMGTHT TAPRPLIPQL IQPTTIGANP TLPMFVAPSF 300 MMPSLIQPHA PAPPKPQLAA SSASNIPSIP LPHPYNPSLT QTVNMDILNN MAALYRQQMS 360 QNNQALSSMS QPHNERSR

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MHGLGGLQHT SGEKPILGGA HDTLESIVKQ ATWQQHYEPG KWVGEGHAPH SINSIAASSG  60
EHGAVPTLSR RRAWSNTDYR GTKFGSKNAN VNVLEECDVH SGCASAAATF CRDNDTTMIT  120
SPSLQSAPSL KTVEEDSACH CGSDIRDNQD DRDSKAETGQ TNSKRRSRTA AIHNQSERKR  180
RDRINQKMKA LQRLVPNASK TDKASMLDEV INYLKQLQAQ IQMMNMTSMP QMMVPLAMQQ  240
QLQMSMLARM GAGLGMGMGM VNINNMGTHT TAPRPLIPQL IQPTTIGANP TLPMFVAPSF  300
MMPSLIQPHA PAPPKPQLAA SSASNIPSIP LPHPYNPSLT QTVNMDILNN MAALYRQQMS  360
QNNQALSSMS QPHNERSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	164	181	KRRSRTAAIHNQSERKRR
2	177	182	ERKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	4e-31	bHLH family protein