PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027333780.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 1051aa MW: 115590 Da PI: 5.101

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027333780.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.9	2.3e-18	37	83	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l XP_027333780.1 37 KGQWTPEEDDILRKAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 83 799**************************9.**********986 PP
2	Myb_DNA-binding	61.6	1.7e-19	89	135	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde ++++v+++G++ W++Ia++++ gR +kqc++rw+++l XP_027333780.1 89 KGPWSKEEDEVIIELVNKFGPKKWSSIAQHLP-GRIGKQCRERWHNHL 135 79****************************.***********97 PP
3	Myb_DNA-binding	49.1	1.3e-15	141	183	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++ +G++ W+ ++ ++ gRt++ +k++w+ XP_027333780.1 141 KEAWTQEEELALIRAHQIFGNK-WAELSKVLP-GRTDNAIKNHWN 183 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1051 aa Download sequence
MDSERNIPPP SLGHVDGVQK VRALHGRTTG PTRRSTKGQW TPEEDDILRK AVQRFKGKNW 60 KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEVI IELVNKFGPK KWSSIAQHLP 120 GRIGKQCRER WHNHLNPTIN KEAWTQEEEL ALIRAHQIFG NKWAELSKVL PGRTDNAIKN 180 HWNSSVKKKL DSYLASGLLT QFESVPHVGN SNQPTKLQCF ADDKGPMGTE GEEVSECSQE 240 SANAVHFPSG RGASSVDLKT GEEYRPNEEC SLGKDHSVSQ LQASCSEPYY VSIDDVAICI 300 PDNADQKVCT SQFIEQQHLH EPGNSISGDC QFNLHSLPNI SPMDLGHGSV QLQSDCIASS 360 EICDMVNVPF KTSVGFGVPT SMGPASMDSL KPEHMFISDD ECCRVLFSDT MNDGCFSSGD 420 YNKGEDMVEF SGCTSFLCQP SNIQISESGG TSTPELTCHR CSNNFKGTSS SQSVPPVLSA 480 SDGRLVSTAN DNQSYGPEDN QFVYRVPANF THVNDISISP CIDEIDSAVM QEQRNIPKGT 540 SKFIPASSFS CGSDAKQTCN PTDEKTNVNT EKETGSLCYE PPRFPSLDIP FFSCDLAQSG 600 SDMQQEFSPL GIRQFMMSSM NCLTPFRLWD SPSRDDSPDA LLKSAAKTFA GTPSILKKRN 660 RDLLSPLSDK RIDKKLEIDM TSTLTKNFSS LDVMFDDNET REAGMPSPSS LQKQNTSASI 720 ENVDKEICRQ AHKGEQVEEP IKSAILNEEN IKKDTVDSNS KDNVKQQPLD SKMKLAATAE 780 QQQPSGVLVE HDMNDLSLYS PDQVGLKSDK SLSSSSKTPK NLNNRSLEEA PNCSVPLKLS 840 SENPCSRVKS PCIRAKEHEK LSVSVTRVQA TGENSGDQTR KDGSFEPCSI FGGTPFRKSI 900 ESPSAWKSPW FINTFLSSPG LGTEITIEDF GYFISPGDRS YDAIGLLKQI SEQTAATYAN 960 AQEVLGNETP KGLPEDAPGN DKDGFQENND PPNQPGNHCQ LASNALIERR ILDFSECGTP 1020 GKEGDNSKSD NSKASSVSFS SPSSYLLKGC R

Sequence ? help Back to Top

Protein Sequence Length: 1051 aa Download sequence

MDSERNIPPP SLGHVDGVQK VRALHGRTTG PTRRSTKGQW TPEEDDILRK AVQRFKGKNW  60
KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEVI IELVNKFGPK KWSSIAQHLP  120
GRIGKQCRER WHNHLNPTIN KEAWTQEEEL ALIRAHQIFG NKWAELSKVL PGRTDNAIKN  180
HWNSSVKKKL DSYLASGLLT QFESVPHVGN SNQPTKLQCF ADDKGPMGTE GEEVSECSQE  240
SANAVHFPSG RGASSVDLKT GEEYRPNEEC SLGKDHSVSQ LQASCSEPYY VSIDDVAICI  300
PDNADQKVCT SQFIEQQHLH EPGNSISGDC QFNLHSLPNI SPMDLGHGSV QLQSDCIASS  360
EICDMVNVPF KTSVGFGVPT SMGPASMDSL KPEHMFISDD ECCRVLFSDT MNDGCFSSGD  420
YNKGEDMVEF SGCTSFLCQP SNIQISESGG TSTPELTCHR CSNNFKGTSS SQSVPPVLSA  480
SDGRLVSTAN DNQSYGPEDN QFVYRVPANF THVNDISISP CIDEIDSAVM QEQRNIPKGT  540
SKFIPASSFS CGSDAKQTCN PTDEKTNVNT EKETGSLCYE PPRFPSLDIP FFSCDLAQSG  600
SDMQQEFSPL GIRQFMMSSM NCLTPFRLWD SPSRDDSPDA LLKSAAKTFA GTPSILKKRN  660
RDLLSPLSDK RIDKKLEIDM TSTLTKNFSS LDVMFDDNET REAGMPSPSS LQKQNTSASI  720
ENVDKEICRQ AHKGEQVEEP IKSAILNEEN IKKDTVDSNS KDNVKQQPLD SKMKLAATAE  780
QQQPSGVLVE HDMNDLSLYS PDQVGLKSDK SLSSSSKTPK NLNNRSLEEA PNCSVPLKLS  840
SENPCSRVKS PCIRAKEHEK LSVSVTRVQA TGENSGDQTR KDGSFEPCSI FGGTPFRKSI  900
ESPSAWKSPW FINTFLSSPG LGTEITIEDF GYFISPGDRS YDAIGLLKQI SEQTAATYAN  960
AQEVLGNETP KGLPEDAPGN DKDGFQENND PPNQPGNHCQ LASNALIERR ILDFSECGTP  1020
GKEGDNSKSD NSKASSVSFS SPSSYLLKGC R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein