PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027333779.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 1052aa MW: 115689 Da PI: 5.101 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.9 | 2.3e-18 | 37 | 83 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l XP_027333779.1 37 KGQWTPEEDDILRKAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 83 799****************************9.************986 PP | |||||||
2 | Myb_DNA-binding | 61.6 | 1.7e-19 | 89 | 135 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde ++++v+++G++ W++Ia++++ gR +kqc++rw+++l XP_027333779.1 89 KGPWSKEEDEVIIELVNKFGPKKWSSIAQHLP-GRIGKQCRERWHNHL 135 79******************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 49.1 | 1.3e-15 | 141 | 183 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++ +G++ W+ ++ ++ gRt++ +k++w+ XP_027333779.1 141 KEAWTQEEELALIRAHQIFGNK-WAELSKVLP-GRTDNAIKNHWN 183 579*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1052 aa Download sequence |
MDSERNIPPP SLGHVDGVQK VRALHGRTTG PTRRSTKGQW TPEEDDILRK AVQRFKGKNW 60 KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEVI IELVNKFGPK KWSSIAQHLP 120 GRIGKQCRER WHNHLNPTIN KEAWTQEEEL ALIRAHQIFG NKWAELSKVL PGRTDNAIKN 180 HWNSSVKKKL DSYLASGLLT QFESVPHVGN SNQPTKLQCF ADDKGPMGTE GEEVSECSQE 240 SANAVHFPSG RGASSVDLKT GEEYRPNEEC SLGKDHSVSQ LQASCSEPYY VSIDDVAICI 300 PDNADQKVCT SQFIEQQHLH EPGNSISGDC QFNLHSLPNI SPMDLGHGSV QLQSDCIASS 360 EICDMVNVPF KTSVGFGVPT SMGPASMDSL KPEHMFISDD ECCRVLFSDT MNDGCFSSGD 420 YNKGEDMVEF SGCTSFLCQP SNIQISESGG TSTPELTCHR CSNNFKGTSS SQSVPPVLSA 480 SDGRLVSTAN DNQSYGPEDN QFVYRVPANF THVNDISISP CIDEIDSAVM QEQRNIPKGT 540 SKFIPASSFS CGSDAKQTCN PTDEKTNVNT EKETGSLCYE PPRFPSLDIP FFSCDLAQSG 600 SDMQQEFSPL GIRQFMMSSM NCLTPFRLWD SPSRDDSPDA LLKSAAKTFA GTPSILKKRN 660 RDLLSPLSDK RIDKKLEIDM TSTLTKNFSS LDVMFDDNET REAGMPSPSS LQKQNTSASI 720 ENVDKEICRQ AHKGEQVEEP IKSAILNEEN IKKDTVDSNS KDNVKQQPLD SKMKLAATAE 780 VQQQPSGVLV EHDMNDLSLY SPDQVGLKSD KSLSSSSKTP KNLNNRSLEE APNCSVPLKL 840 SSENPCSRVK SPCIRAKEHE KLSVSVTRVQ ATGENSGDQT RKDGSFEPCS IFGGTPFRKS 900 IESPSAWKSP WFINTFLSSP GLGTEITIED FGYFISPGDR SYDAIGLLKQ ISEQTAATYA 960 NAQEVLGNET PKGLPEDAPG NDKDGFQENN DPPNQPGNHC QLASNALIER RILDFSECGT 1020 PGKEGDNSKS DNSKASSVSF SSPSSYLLKG CR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32730.2 | 0.0 | MYB family protein |