PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027333679.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | LBD | ||||||||
Protein Properties | Length: 156aa MW: 17588.1 Da PI: 8.0416 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 124.8 | 4.4e-39 | 5 | 105 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk +rr+C++dC+++pyfpa++p++fa+vh+++G snv k+l+++p+ re+a++sl++eA++r++dPvyG++g+i+kl+qq+++++ la XP_027333679.1 5 RCAACKSQRRRCPSDCIFSPYFPANDPQRFACVHRIYGGSNVGKMLQQIPPYLREQAANSLYFEAQCRIQDPVYGCAGIISKLSQQIHSTEIALA 99 6*******************************************************************************************999 PP DUF260 96 llkeel 101 ++++++ XP_027333679.1 100 KIQTQI 105 999875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MISGRCAACK SQRRRCPSDC IFSPYFPAND PQRFACVHRI YGGSNVGKML QQIPPYLREQ 60 AANSLYFEAQ CRIQDPVYGC AGIISKLSQQ IHSTEIALAK IQTQIAYHKL QIPRTEIESN 120 FNVLSTIEAE SNLDVLPPQS SSMGEFQWPL QASWFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26620.1 | 3e-50 | LBD family protein |