PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027333545.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ERF | ||||||||
Protein Properties | Length: 239aa MW: 26859.4 Da PI: 4.3357 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.6 | 1.3e-17 | 26 | 74 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ykGVr +k +g+Wv+eIr p++ r r++lg+++t e+Aa+a +aa +l+g XP_027333545.1 26 YKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDTQEKAARAFDAALYCLRG 74 9****999.**********933...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MSGADPTCYS IDSCSANNNN TSSKMYKGVR KRKWGKWVSE IRLPNSRERI WLGSYDTQEK 60 AARAFDAALY CLRGKSASFN FPDTPLNLDI NVPHQSLSPQ EIQEVAAKFA NNHPPLESAQ 120 EEPLLESQSG GDHSFGLFES NKSKSNPESS SLSIPMYDCD YGTMQVDHGD LEATDWTFFN 180 MLDDLNGSDF RLYFGPDKMP SGDLLYSTQP PLLFEDNNGD EIEGGDTFSN HSYLWSWNF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 27 | 33 | KGVRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74930.1 | 1e-41 | ERF family protein |