PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027333308.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family TCP
Protein Properties Length: 372aa    MW: 41835.8 Da    PI: 8.8112
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027333308.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP138.17.5e-431192733133
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...................ssssaseceaess 78 
                     gkkdrhski T++g+RdRR+Rls+e+a+rfF Lqd+LGfdk+skt+eWLl+qak +i +l +                    s+ s sec     
  XP_027333308.1 119 GKKDRHSKINTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVEWLLNQAKVEINQLEREnnknkkknhhtccssagakSAASTSEC----- 208
                     8**************************************************************777765555555555443322222444..... PP

             TCP  79 sssasnsssg.....................kaaksaakskksqksaasalnlakesrakarararertrekmrik 133
                              +                      +  + +k k+s+ks  +++ lake r+kar+rarert+ekmr++
  XP_027333308.1 209 ---------EegvssldevvvsgnqepqevvPKVVKRKKIKHSRKS--AFHPLAKECRKKARERARERTKEKMRNR 273
                     .........1333334444444445555444333444344444444..4599**********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MQSQTSDMFV LSNSNTSHNG NYPISYSDQA FSCCRPFSID SESNQASKQE NNNCDLSSPP  60
PLSFFHFPSP PFEDTEIFLQ HHHDFLLHQT LSHDPEPQPF ITVEGSIRSA EQIPRRKHGK  120
KDRHSKINTA RGLRDRRMRL SLEVAKRFFG LQDMLGFDKA SKTVEWLLNQ AKVEINQLER  180
ENNKNKKKNH HTCCSSAGAK SAASTSECEE GVSSLDEVVV SGNQEPQEVV PKVVKRKKIK  240
HSRKSAFHPL AKECRKKARE RARERTKEKM RNRGLVDDSK QCREDINHDL TQLGSWNPFG  300
TGEQCGTKSR TVNPSLDVLT EAKKGSHPAK EHLGTVDAMA HDDALASLSK WGPSMIFSSL  360
SNSGFPQEVS LN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.26e-26TCP family protein