PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027332895.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 895aa    MW: 98700.9 Da    PI: 6.6653
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027332895.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.89.8e-24129230199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_027332895.1 129 FCKTLTASDTSTHGGFSVPRRAAEKVfppldytQQPPAQ--ELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 219
                     99*****************************96555555..8************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_027332895.1 220 KNQLLLGIRRA 230
                     9999****997 PP
2Auxin_resp121.75.6e-40255338183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+++YnPras+seFv++++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k
  XP_027332895.1 255 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 338
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 895 aa     Download sequence    
MKLSSSGFNQ PAEEEGEKKC LNSELWHACA GPLVSLPPVG SRVVYFPQGH SEQVAASTNR  60
EVDAHIPNYP NLPPQLICQL HNVTMHADAE TDEVYAQMTL QPLSPQEQKE VYLLPAELGA  120
PSKQPTNYFC KTLTASDTST HGGFSVPRRA AEKVFPPLDY TQQPPAQELI ARDLHDNEWK  180
FRHIFRGQPK RHLLTTGWSV FVSAKRLVAG DSVLFIWNEK NQLLLGIRRA NRPQTIMPSS  240
VLSSDSMHIG LLAAAAHAAA TNSRFTIFYN PRASPSEFVI PLAKYVKAVY HTRVSVGMRF  300
RMLFETEESS VRRYMGTITG ISDLDPVRWP NSHWRSVKVG WDESTAGERQ PRVSLWEIEP  360
LTTFPMYPSP FPLRLRRPWP SGLPSLYGLK DGDMNIGSPF MWLQSGLGDQ GMQSLSFQGL  420
GVTPWMQPRL DASIPGLQPD LYQAMASAAF QEMRTMDPAK SSQSLLQFQQ TSNVPSAHTS  480
EVQRQVLPQS QPQNTLLHSF PENQVPAQSQ LLQQQLHRYH PYNDQRQQQQ QLKNLPVQQQ  540
LPNVISPLSN FASGTQSQSP PMQALGSHCQ QQSFPEPIRN HISGSDVSPI QSLLSSFSQD  600
GSSQLHNLNG SNSVISSAAI LPKQIAVEPQ LASAAAHGIL PQVENLGASQ SNVSELTALP  660
PFPGREHSAY HGAADPQSNL LFGINIDPSS LMLQNGMSNL RNIGNVNDSL SLPFPASNCG  720
GATGTDFPLS SNMTTSSCVD ESGFLQSSEN VDQANTPTGT FVKVHKSGSF GRSLDISKFS  780
SYDELRSELA RMFGLEGQLE DPKTQRSGWQ LVFVDRENDV LLLGDDPWQE FVNNVWHIKI  840
LSPLEVQQMG KGLSPSTSAP GHKLPTAGNS CDNYVNQQEL RSPRSGMASM GSFHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein