PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027332851.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | LBD | ||||||||
Protein Properties | Length: 161aa MW: 17879.3 Da PI: 5.6417 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 142.2 | 1.7e-44 | 6 | 105 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +Ca+Ck+lrr+C+kdC++apyfp ++p+kfa+vhk+FGasnv+k+l++lp ++r da+sslvyeA+arardPvyG+vg i+ lq+q+++l+ +la XP_027332851.1 6 PCASCKLLRRRCTKDCTFAPYFPPDEPQKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARARDPVYGCVGAISYLQNQVSELQMQLA 100 7********************************************************************************************** PP DUF260 96 llkee 100 ++++e XP_027332851.1 101 VAQAE 105 99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MGGNSPCASC KLLRRRCTKD CTFAPYFPPD EPQKFAIVHK VFGASNVSKM LQELPVHQRA 60 DAVSSLVYEA NARARDPVYG CVGAISYLQN QVSELQMQLA VAQAEILCIQ MRNEQVIPVP 120 EIDSDQKSNI LQNDLSQYFN FGASSNVIYD SQSIFGHEMI S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30130.1 | 1e-76 | LBD family protein |