PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027332702.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 208aa MW: 24478.9 Da PI: 8.9557 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.4 | 3.7e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+snrqvt+skR+ngilKKA+E+ vLCda+v++iif+ +gk+++y+s XP_027332702.1 9 KRIENSSNRQVTYSKRKNGILKKAKEITVLCDAQVSLIIFAASGKMHDYIS 59 79***********************************************86 PP | |||||||
2 | K-box | 85.7 | 9.3e-29 | 71 | 167 | 1 | 97 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 y+k+sgk+l++ak+e+l+ e+++Lkke++++q e+Rhl+Ged++sL++keL++Le++Le++l ++R+k++e++++ ++ + e+e++e n + XP_027332702.1 71 YHKTSGKRLWDAKHENLNSEIERLKKENDSMQIELRHLKGEDINSLNYKELMSLEDALENGLLSVREKQMEVYRMFRRNDKILEEENRELNFIWQ 165 7999*************************************************************************************998777 PP K-box 96 kk 97 ++ XP_027332702.1 166 QR 167 66 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MGRGKIEIKR IENSSNRQVT YSKRKNGILK KAKEITVLCD AQVSLIIFAA SGKMHDYISP 60 STTLIDVLER YHKTSGKRLW DAKHENLNSE IERLKKENDS MQIELRHLKG EDINSLNYKE 120 LMSLEDALEN GLLSVREKQM EVYRMFRRND KILEEENREL NFIWQQRMAV EGAREVDNGF 180 DQSVRDFNSQ MPFAFRVQPM QPNLQERI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 8e-88 | MIKC_MADS family protein |