PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027332701.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 243aa MW: 26085.6 Da PI: 7.898

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027332701.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	133.4	8.8e-42	45	144	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrr+Ca++C+++pyf ++p+kfa+vhk+FGasnv+k+l ++pe +r da++slvyeA+ r+rdPvyG++g i++lqqq+++l+ael+ XP_027332701.1 45 PCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPEGQRADAANSLVYEANLRLRDPVYGCMGAISALQQQVQSLQAELN 139 7********************************************************************************************** PP DUF260 96 llkee 100 ++++e XP_027332701.1 140 AIRAE 144 99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MFGYPETERL DEIARVRTEG EASPQMGRKH FYGPTSGTAL NTVTPCAACK LLRRRCAEEC 60 PFSPYFSPHE PQKFAAVHKV FGASNVSKML MEVPEGQRAD AANSLVYEAN LRLRDPVYGC 120 MGAISALQQQ VQSLQAELNA IRAEIIKYKY REAASLISSH HAALVSTAEA VSAAISTDSQ 180 GLSQPLPPPS PVPPPPPPPK PLPSPSVILS SLSSSSTSSV YTPPKSTMSH GSISSTENVP 240 YFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40470.1	5e-67	LBD family protein