PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027332489.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 333aa MW: 37580.5 Da PI: 6.6729 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.6 | 2.5e-17 | 20 | 67 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed+ lv++++ +G g+W+t a g++Rt+k+c++rw++yl XP_027332489.1 20 RGPWTVDEDDTLVNYIATHGEGRWNTLALSAGLKRTGKSCRLRWLNYL 67 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.4 | 5e-16 | 73 | 116 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ XP_027332489.1 73 RGNITLEEQLLILELHSRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 116 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MDVKGRGNNT LCEDEMDLRR GPWTVDEDDT LVNYIATHGE GRWNTLALSA GLKRTGKSCR 60 LRWLNYLRPD VRRGNITLEE QLLILELHSR WGNRWSKIAQ YLPGRTDNEI KNYWRTRVQK 120 HAKQLKCDVN SKQFKDTMRY LWMPRLVERI QAAAAASTTS ATTTTAATIS PTNLSTTTTV 180 TTNNGYNYGN NLNNNNFEVN NHGGKMGLTS SVMNNDLVGS QRAQSYTPEN SSTAASSSDS 240 FGTQVSTISD LNDYYSVPVS SNNNPNSIHY YQPSQMSYSD CITSPSGLFP QGLDFQAMEP 300 NNPWNMQSGD SSDNFWNVEN MLFLQQQLMN DNM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06490.1 | 6e-84 | MYB family protein |