PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027331993.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HB-PHD

Protein Properties

Length: 704aa MW: 80402.6 Da PI: 9.5073

Description

HB-PHD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027331993.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	32.2	1.9e-10	488	532	9	53
HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 9 keqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 ++ +e L ++F++n p ++++e L+k+lgL++++V+ WF+N R+ XP_027331993.1 488 RDAVEKLRQVFAENELPPRSMKEGLSKELGLDTEKVSKWFKNARY 532 678999*************************************97 PP
2	PHD	41.5	3e-14	225	280	1	51
SBTTTSS..TCTTSSEEEBS.SSSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgk..sdeegelvlCd.gCkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ C+ + +++++lCd +C+++fH+kCl+++l++e++p g w+C+ C++k XP_027331993.1 225 FCAKCKTreELPDNDIILCDgTCNRAFHQKCLDPPLDTENIPPGeqGWFCKFCECK 280 69999954445*****56****************9999*****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 704 aa Download sequence
MRDSEKQLNS RGSKKSSHLK ARTECKRKKH KLKVESKSHT KNVGTNISKK RVIDSSLKAK 60 GPRKDSSDKT LIAGQNLSKI HRKSSQKPSS KLQGNKSSHS SRKEEKDADG VVNLQKMKRK 120 RKRKKKRQRN NADLDDASRL QRRTRYLLIK MKLEQNLIDA YSGEGWKGQS REKIRPEKEL 180 QRARKQILKC KLGIRDAIRQ LDSLSSLSSI EDSTPDGSVY HEHIFCAKCK TREELPDNDI 240 ILCDGTCNRA FHQKCLDPPL DTENIPPGEQ GWFCKFCECK MQILEAMNAH LGTHFSLHST 300 WQDVFKEEAA IPDGDTMLLN PEEEWPSDDS EDGDYNPERK EDSQNINTEG TDDDASDDLS 360 SSTSLCYSDG ECSPVDGVSH EYFSVNSSID SDESEEKACG RRQRKAVDYK KLYDEMFGKD 420 APTCEQLSED EDWGPGKRKR REKESDAVDS LMTLHESENK CPNNEENNMT RKASSSINIK 480 RPCFRIPRDA VEKLRQVFAE NELPPRSMKE GLSKELGLDT EKVSKWFKNA RYLALKNRKQ 540 SEGADQLQSI TSRKNSRMQN QENADLLKPK SLKITVRHSL KDVKNVTGRK KMKSSSSSFK 600 KRQPDISPPQ GENVNKDFVE ISDDVSLKKL LKEKKRMVNF TFEGDSQAAE LEFERLSKLK 660 IKLDIMKQKL AGFQNYRGNG SNEPQSNEPS IVYVPIAVLR EKVE

Sequence ? help Back to Top

Protein Sequence Length: 704 aa Download sequence

MRDSEKQLNS RGSKKSSHLK ARTECKRKKH KLKVESKSHT KNVGTNISKK RVIDSSLKAK  60
GPRKDSSDKT LIAGQNLSKI HRKSSQKPSS KLQGNKSSHS SRKEEKDADG VVNLQKMKRK  120
RKRKKKRQRN NADLDDASRL QRRTRYLLIK MKLEQNLIDA YSGEGWKGQS REKIRPEKEL  180
QRARKQILKC KLGIRDAIRQ LDSLSSLSSI EDSTPDGSVY HEHIFCAKCK TREELPDNDI  240
ILCDGTCNRA FHQKCLDPPL DTENIPPGEQ GWFCKFCECK MQILEAMNAH LGTHFSLHST  300
WQDVFKEEAA IPDGDTMLLN PEEEWPSDDS EDGDYNPERK EDSQNINTEG TDDDASDDLS  360
SSTSLCYSDG ECSPVDGVSH EYFSVNSSID SDESEEKACG RRQRKAVDYK KLYDEMFGKD  420
APTCEQLSED EDWGPGKRKR REKESDAVDS LMTLHESENK CPNNEENNMT RKASSSINIK  480
RPCFRIPRDA VEKLRQVFAE NELPPRSMKE GLSKELGLDT EKVSKWFKNA RYLALKNRKQ  540
SEGADQLQSI TSRKNSRMQN QENADLLKPK SLKITVRHSL KDVKNVTGRK KMKSSSSSFK  600
KRQPDISPPQ GENVNKDFVE ISDDVSLKKL LKEKKRMVNF TFEGDSQAAE LEFERLSKLK  660
IKLDIMKQKL AGFQNYRGNG SNEPQSNEPS IVYVPIAVLR EKVE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	118	124	KRKRKRK
2	118	126	KRKRKRKKK
3	119	125	KRKRKRK
4	119	127	KRKRKRKKK
5	119	124	RKRKRK
6	119	126	RKRKRKKK
7	120	126	KRKRKRK
8	121	127	KRKRKRK
9	121	125	RKRKK
10	122	152	KRKKKRQRNNADLDDASRLQRRTRYLLIKMK
11	123	153	KRKKKRQRNNADLDDASRLQRRTRYLLIKMK
12	124	129	KKKRQR
13	124	154	KRKKKRQRNNADLDDASRLQRRTRYLLIKMK
14	438	443	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29940.2	1e-149	HB-PHD family protein