PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027331420.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family M-type_MADS
Protein Properties Length: 355aa    MW: 40187.6 Da    PI: 7.2896
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027331420.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF70.31.8e-221053245
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    + e+ snr+vt+skR+ gilKKA+ELS+LCd+++ +++fs+tgk
  XP_027331420.1 10 KLESISNRHVTYSKRKSGILKKAKELSILCDIDIVLLMFSPTGK 53
                    57899**************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MGRVKLKIKK LESISNRHVT YSKRKSGILK KAKELSILCD IDIVLLMFSP TGKATLLQGE  60
RSNIEEIIAK FSQHSPQERA KRKMESLEAL KKTFKKLDHD VKLQDFLGSS SQTVEELTYQ  120
LRILQAQLTE VHQRLSYWNN LEKINSIEHL KQMEDSLRES INRVCLQKEN LGKHQLISLE  180
CANQLQEGMT LPLMMAGLQE SQPLSWLLNS DNRQLMLPSE PKYLPFSDNT NRDVECSTDI  240
SLPGYSGYIG SNKLEVGSSP QVTSLGQGGA ALNELNGTAY LNVQHCDQFA YPPPPDIEEV  300
KHQPTTMNSK PNTVEYQVNS NFDLPRSLFE NGHQFWNSAS GSCGIAMYNE NGYHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18750.12e-97M-type_MADS family protein