PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027331301.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

CO-like

Protein Properties

Length: 371aa MW: 40189.2 Da PI: 6.4982

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027331301.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.3	1.2e-06	20	60	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 + C+ ++ + lfC+ ++ +lC C +++H H+ XP_027331301.1 20 KPCDSCKLASAALFCRPDSAFLCIACDSKIHCAnklasrHE 60 68****99******************95545666665 PP
2	zf-B_box	27.9	5e-09	62	107	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ ++ C+ + lC +C + +H+ H++vp+ XP_027331301.1 62 VWMCEVCEQAPAAVTCKADAAALCVTCDSDIHSAnplarrHERVPV 107 689****************************6689999999986 PP
3	CCT	69.7	7.4e-24	297	340	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k++ XP_027331301.1 297 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 340 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MGIERGGLKG FRTGWTVPPK PCDSCKLASA ALFCRPDSAF LCIACDSKIH CANKLASRHE 60 RVWMCEVCEQ APAAVTCKAD AAALCVTCDS DIHSANPLAR RHERVPVEPF LDSADSIVKA 120 SVAASFGFIV PSDDAVASDG FAHDDADAAA WLIPNPDFGS KLMDAPDIKS KELFFAEMDP 180 FLDFDYSNSF QNNHNHNSAG NDSVVPVQTK PAPALAPLIN HQSESCFDID FCRSKLSSFN 240 YPSQSLSQSV SSSSLDVGVV PDGNTVSEIS YSMGRNGSDV SGGSSGQGAT QLCGMDREAR 300 VLRYREKRKN RKFEKTIRYA SRKAYAETRP RIKGRFAKRT EIDSDVERLY SPAAAAAALM 360 LDTPYGVVPS F

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MGIERGGLKG FRTGWTVPPK PCDSCKLASA ALFCRPDSAF LCIACDSKIH CANKLASRHE  60
RVWMCEVCEQ APAAVTCKAD AAALCVTCDS DIHSANPLAR RHERVPVEPF LDSADSIVKA  120
SVAASFGFIV PSDDAVASDG FAHDDADAAA WLIPNPDFGS KLMDAPDIKS KELFFAEMDP  180
FLDFDYSNSF QNNHNHNSAG NDSVVPVQTK PAPALAPLIN HQSESCFDID FCRSKLSSFN  240
YPSQSLSQSV SSSSLDVGVV PDGNTVSEIS YSMGRNGSDV SGGSSGQGAT QLCGMDREAR  300
VLRYREKRKN RKFEKTIRYA SRKAYAETRP RIKGRFAKRT EIDSDVERLY SPAAAAAALM  360
LDTPYGVVPS F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57660.1	1e-104	CO-like family protein