PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027331266.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 246aa MW: 28362.4 Da PI: 9.6178 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 84.8 | 5e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+EL +LCdaev v+ifsstgkly+++s XP_027331266.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVMIFSSTGKLYDFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 86.4 | 5.8e-29 | 81 | 170 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++++ + +q+e+a L+++++nLq+++R+++Ge+L+ L++keL++Le+qLe sl +R kK++ll+++i+el +k + +++en++L kk+ XP_027331266.1 81 SSASEIKFWQREAAMLRQQLHNLQESHRKMMGEELSGLTVKELRNLENQLEISLHGVRMKKDQLLMDEIQELNRKGNLIHQENMELYKKV 170 688999*********************************************************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGVMIFSS TGKLYDFAST 60 SMKSVIDRYN KSKEEHHQLG SSASEIKFWQ REAAMLRQQL HNLQESHRKM MGEELSGLTV 120 KELRNLENQL EISLHGVRMK KDQLLMDEIQ ELNRKGNLIH QENMELYKKV NLICQENMEL 180 KKKVYGTKDE NETKRNSVLT NGLVIGEDLQ VPVNLQLSQP ENQNYKAPSG TTKLGYDYDH 240 FADRPH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57230.1 | 1e-108 | MIKC_MADS family protein |