PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027331266.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 246aa    MW: 28362.4 Da    PI: 9.6178
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027331266.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF84.85e-271059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    ri+n++ rqvtfskRrng+lKKA+EL +LCdaev v+ifsstgkly+++s
  XP_027331266.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVMIFSSTGKLYDFAS 59
                    8***********************************************86 PP

2K-box86.45.8e-2981170998
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                      ++++ + +q+e+a L+++++nLq+++R+++Ge+L+ L++keL++Le+qLe sl  +R kK++ll+++i+el +k + +++en++L kk+
  XP_027331266.1  81 SSASEIKFWQREAAMLRQQLHNLQESHRKMMGEELSGLTVKELRNLENQLEISLHGVRMKKDQLLMDEIQELNRKGNLIHQENMELYKKV 170
                     688999*********************************************************************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGVMIFSS TGKLYDFAST  60
SMKSVIDRYN KSKEEHHQLG SSASEIKFWQ REAAMLRQQL HNLQESHRKM MGEELSGLTV  120
KELRNLENQL EISLHGVRMK KDQLLMDEIQ ELNRKGNLIH QENMELYKKV NLICQENMEL  180
KKKVYGTKDE NETKRNSVLT NGLVIGEDLQ VPVNLQLSQP ENQNYKAPSG TTKLGYDYDH  240
FADRPH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.11e-108MIKC_MADS family protein