PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027330949.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 222aa MW: 25186.7 Da PI: 6.1574 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.2 | 8.9e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr gi+KKAeELSvLCdaev +iifs tgkl+ey+s XP_027330949.1 9 KKIDNLTARQVTFSKRRRGIFKKAEELSVLCDAEVGLIIFSATGKLFEYAS 59 68***********************************************86 PP | |||||||
2 | K-box | 50.3 | 1e-17 | 77 | 167 | 9 | 98 |
K-box 9 leeakaeslq.qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +e+ +++lq +++ L ke+ +++R++ Ged e L+l +L+qLe+ Le++l+++ ++K+ ++ +i lq+k +l+een++L++k XP_027330949.1 77 NESDRSQKLQlEHYVELSKEVADKTQQLRQMSGEDFEGLNLDDLKQLEKTLETGLEHVVETKETRIMGEIIALQQKGIKLEEENRKLKQKT 167 4555566666245789999999999999*************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MARQKIKIKK IDNLTARQVT FSKRRRGIFK KAEELSVLCD AEVGLIIFSA TGKLFEYASS 60 SMKDIITRYN QHLHDTNESD RSQKLQLEHY VELSKEVADK TQQLRQMSGE DFEGLNLDDL 120 KQLEKTLETG LEHVVETKET RIMGEIIALQ QKGIKLEEEN RKLKQKTAML WKGKSSLLVD 180 SDITMQEVVS SDSINVCSCN SGPSLEDDSS DTFLKLGLPF PS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24540.1 | 4e-75 | MIKC_MADS family protein |