PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027330817.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 543aa    MW: 60821.7 Da    PI: 6.2797
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027330817.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4531.9e-1381735431374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++ L++cA+a++++dl  aq+l+ +l++++s +g+p+qRl ay++e+L arla s+s++yk+l+++e +   s+e l+++++++ev+P++kf++
  XP_027330817.1 173 LKQILISCAKAIADNDLLIAQWLMDELRQMVSVSGEPIQRLGAYMLEGLVARLAASGSSIYKSLRCKEPE---SAELLSYMHILYEVCPYFKFGY 264
                     5789*****************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN aI ea++ e++vHiiDf+i qG QW++L+qa+a+Rp+gpp++RiTg+++++s   +   l+ +g+rL+k+Ae+++vpfef++ +a +  d
  XP_027330817.1 265 MSANGAIAEAMKDEDTVHIIDFQIAQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAyaRGGGLHIVGKRLSKLAEHFKVPFEFHA-AAISGCD 358
                     ******************************************************998899999************************.88899** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++l++L v+pg alaVn++++lh+++desvs++++rd++L+lvkslsPkvv++veqe+++n++ F  rfle+l+yy+a+f+s++++lpr+++eri
  XP_027330817.1 359 VQLHNLGVRPGQALAVNFAFMLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFIPRFLETLDYYTAMFESIDVTLPRDHKERI 453
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +vE+++l+r++vn++aceg er+erhe l+kWr+r+ +aGF+p+pls+ ++ ++k ll++++++ yr+ee++g+l+lgW++r Lv+ +aW+
  XP_027330817.1 454 NVEQHCLARDLVNIIACEGMERVERHELLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSDR-YRLEERDGALYLGWMNRDLVASCAWK 543
                     **************************************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    
MQASEQHRSS SMYHQPLQQF EAYCMPQYRT LNHQLYYHNG GHGTHFSNPS SSEFYCTLES  60
SSAAGSFTVY NSPSTVSFSP NGSPISQHDS QSYPPDQHNS PENTYGSPMS GSCITDDLSS  120
FKHKLRELES VMFGPDSDNL DSYDSAISNE TNFVSLEMDS LRQTMLAISS KSLKQILISC  180
AKAIADNDLL IAQWLMDELR QMVSVSGEPI QRLGAYMLEG LVARLAASGS SIYKSLRCKE  240
PESAELLSYM HILYEVCPYF KFGYMSANGA IAEAMKDEDT VHIIDFQIAQ GSQWITLIQA  300
FAARPGGPPH IRITGIDDST SAYARGGGLH IVGKRLSKLA EHFKVPFEFH AAAISGCDVQ  360
LHNLGVRPGQ ALAVNFAFML HHMPDESVST QNHRDRLLRL VKSLSPKVVT LVEQESNTNT  420
AAFIPRFLET LDYYTAMFES IDVTLPRDHK ERINVEQHCL ARDLVNIIAC EGMERVERHE  480
LLGKWRSRFA MAGFTPYPLS SLVNGTIKKL LENYSDRYRL EERDGALYLG WMNRDLVASC  540
AWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein