PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027330553.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 543aa    MW: 60995.9 Da    PI: 5.3595
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027330553.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS444.66.7e-1361735431374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+e L++cA+av+ +d+e a++l+++l++++s +g+p++Rl ay++eAL arl++s+s++yka +++e +    +e l++++l++ev+P+lkf++
  XP_027330553.1 173 LKEMLFTCAKAVAGNDMETAEWLMSELRKMVSISGNPTERLGAYMLEALVARLSSSGSTIYKASKCKEPT---GKELLSYMHLLYEVCPYLKFGY 264
                     5789*****************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN aI eav++e++vHiiDf+i+qG+QW++L+qaLasR++gpp++RiTgv++++s   +   le +g+rL+++A++++vpfef++ +  + ++
  XP_027330553.1 265 MSANGAIAEAVKEESEVHIIDFQINQGIQWVSLIQALASRAGGPPKIRITGVDDSNSAyyRGGGLEIVGKRLSRLAHSCNVPFEFHA-IGVAPSE 358
                     ******************************************************98889999*************************.688899* PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++le+L+++p Ea+aVn++++lh+++desv+ +++rd++++l k lsPkvv++veqe+++n+ +Fl rf+e+++yy a+f+s+++ lpre++eri
  XP_027330553.1 359 VRLEDLELRPSEAIAVNFAMMLHHVPDESVDCQNHRDRLVRLAKCLSPKVVTLVEQESNTNHLPFLPRFVETMNYYLAVFESIDVALPREHKERI 453
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +vE+++l+ e+vn+vacegaer+erhe l kWr+r+++aGF+p+pls++++ ++k l + ++++ y++ee++g+l+lgW++++Lvs +aWr
  XP_027330553.1 454 NVEQHCLATEVVNLVACEGAERVERHELLLKWRSRFTMAGFTPYPLSSFINGSIKNLQQSYQGQ-YTLEERDGALCLGWMNQALVSSCAWR 543
                     **************************************************************77.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    
MSQKHKMSFG SGSFSIEPVQ NLGSYCFLQN ENTDNYSSSD NSSHATYPSF HNLEQYCTLE  60
SSANNSFPYL NSPSTVSFSP NNSPVSKLQS KSYVLSSQHS LEIINDSLEN ESCLTHNQDD  120
LRHKIRELES AMLGHDSDIL DTYDTVIPEE SDSFLLEAER WKKMMEVISR GDLKEMLFTC  180
AKAVAGNDME TAEWLMSELR KMVSISGNPT ERLGAYMLEA LVARLSSSGS TIYKASKCKE  240
PTGKELLSYM HLLYEVCPYL KFGYMSANGA IAEAVKEESE VHIIDFQINQ GIQWVSLIQA  300
LASRAGGPPK IRITGVDDSN SAYYRGGGLE IVGKRLSRLA HSCNVPFEFH AIGVAPSEVR  360
LEDLELRPSE AIAVNFAMML HHVPDESVDC QNHRDRLVRL AKCLSPKVVT LVEQESNTNH  420
LPFLPRFVET MNYYLAVFES IDVALPREHK ERINVEQHCL ATEVVNLVAC EGAERVERHE  480
LLLKWRSRFT MAGFTPYPLS SFINGSIKNL QQSYQGQYTL EERDGALCLG WMNQALVSSC  540
AWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.10.0GRAS family protein