PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027329822.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 244aa MW: 28130.7 Da PI: 9.9634 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.1 | 3.6e-31 | 25 | 74 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fss+g+lyey+ XP_027329822.1 25 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYA 74 79***********************************************8 PP | |||||||
2 | K-box | 107.9 | 1.2e-35 | 93 | 189 | 4 | 100 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 s+ +s++ea+++ +qqe++kLk++i+ +q+ +Rh+lGe L+sLslkeL++Le++Lek+l+++Rs+K+e l++ ie +qk+e elq++n+ Lr+k+ XP_027329822.1 93 SNAESVSEANTQFYQQESSKLKRQIRDIQNLNRHILGEALSSLSLKELKNLESRLEKGLSRVRSRKHETLFADIEFMQKREIELQNHNNFLRAKI 187 444559****************************************************************************************9 PP K-box 99 ee 100 +e XP_027329822.1 188 AE 189 86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MEFPNQAISE GSSQKKTGRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE LSVLCDAEVA 60 LVVFSSRGRL YEYANNSVRG TIERYKKACA ASSNAESVSE ANTQFYQQES SKLKRQIRDI 120 QNLNRHILGE ALSSLSLKEL KNLESRLEKG LSRVRSRKHE TLFADIEFMQ KREIELQNHN 180 NFLRAKIAEH ERAQQQPQQQ PNLMPGNVCE SIPSQSYDRN FFPVNLIDSN HHYSRQDQTA 240 LQLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58780.1 | 8e-94 | MIKC_MADS family protein |