PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027329821.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | NF-YA | ||||||||
Protein Properties | Length: 195aa MW: 22463.8 Da PI: 10.7291 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 102.3 | 4.7e-32 | 100 | 156 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep++VNaKQy++Il+RRq+Rak+e+ekk+ +++rkpylheSRh hAlrR+Rg+gGrF XP_027329821.1 100 EEPVFVNAKQYHGILRRRQSRAKAESEKKT-TRNRKPYLHESRHLHALRRARGCGGRF 156 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MTSQIMKLMG SSSQNHRCNL LQMEFLMQVL VLRMFSMQHL HSLELSMLWH RHPLTHIQIR 60 TTEVSLPPMM HNLTPHSPMV HLQLMGIQQA GVPLPTDTVE EPVFVNAKQY HGILRRRQSR 120 AKAESEKKTT RNRKPYLHES RHLHALRRAR GCGGRFLNSK KTENQQNEVA STEESQSNAS 180 LNSDKNELTP SDRTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 3e-50 | NF-YA family protein |