PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027329546.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 539aa MW: 58881.4 Da PI: 7.9068 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 106.2 | 1.7e-33 | 199 | 256 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k XP_027329546.1 199 DDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSL-DGQITEIVYKGTHNHPK 256 8****************************************.***************85 PP | |||||||
2 | WRKY | 106.8 | 1.1e-33 | 371 | 429 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+++d ++v++tYeg+Hnh+ XP_027329546.1 371 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHD 429 59********************************************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 539 aa Download sequence |
MASSSDNKSQ GLSDHRSASG VPKFKSTPPP SLPLSPPPVS PSSYFAIPPG LSPAELLDSP 60 VLLNSSNVLP SPTTGAFAAQ SFNWKNSSGQ NQRIVKEEDK SFSNFSFQTQ PGPPATSTTT 120 FQSSTVSVQT QPPPPWSFQE ATKQDGYSSG KGMMKTENNS SMQSFSPEIA SVQTNHNNGF 180 QSDYGNYPQQ SQTLSRRSDD GYNWRKYGQK QVKGSENPRS YYKCTYPNCP TKKKVERSLD 240 GQITEIVYKG THNHPKPQST RRNSSSSSSL AIPPSNPIST EIPDQSYATH GSGQMDSAAT 300 PENSSISIGD DDFEHQSSQK CKSGGDEFDD DEPDAKRWKI EGENEGTSAP GSRTVREPRV 360 VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTHP GCPVRKHVER ASHDLRAVIT 420 TYEGKHNHDV PAARGSGNHS VNRPMPNNAA NPTSAATAIR PSAVTHHTNN SLQSQRPQAP 480 PEGQSPFALE MLQSPGSFGF SGFGNPMGSY MNQQQLSDNV FSRAKEEPRD DMFLESLLC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G38470.1 | 1e-109 | WRKY family protein |