PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027329486.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 373aa MW: 41242.6 Da PI: 7.7943

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027329486.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.8	5.3e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT +Ed++l+ +++++G+g+W+t +++ g+ R++k+c++rw++yl XP_027329486.1 14 KGAWTVQEDQKLIAYIQKHGTGSWRTLPQKAGLQRCGKSCRLRWFNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.4	5.8e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg T+eE+e ++++++ lG++ W++Ia++++ Rt++++k++w++yl XP_027329486.1 67 RGQLTQEEEETIIKLHAVLGNR-WSSIAKHLP-MRTDNEIKNYWNSYL 112 7888****************.*****.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MGRTPCCSHE ELRKGAWTVQ EDQKLIAYIQ KHGTGSWRTL PQKAGLQRCG KSCRLRWFNY 60 LRPDIKRGQL TQEEEETIIK LHAVLGNRWS SIAKHLPMRT DNEIKNYWNS YLKKRFEKKC 120 MDPISTVSST ESKSTRLYTV PSKKTSCHGP NATTNQSVSS STKLLNKVAS KILASGYLDA 180 IKSCQPVGAG NNTNESVINP GIGLKDNIRE TLVPNLTSMS SNNSSTSAQI LNKMATSLPH 240 KVLGLEAAKA VFSKMMESGE KGETTSDGSF VGSDEFGVCL DALSLFEEGP HITTIIGSPS 300 RPTTPMFNNQ VTTPSCFSEN EDSWQCVSSN YVSFTNCAEI SMVESSSSTS CFLFENVDLE 360 TCDDEISKYI QYL

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MGRTPCCSHE ELRKGAWTVQ EDQKLIAYIQ KHGTGSWRTL PQKAGLQRCG KSCRLRWFNY  60
LRPDIKRGQL TQEEEETIIK LHAVLGNRWS SIAKHLPMRT DNEIKNYWNS YLKKRFEKKC  120
MDPISTVSST ESKSTRLYTV PSKKTSCHGP NATTNQSVSS STKLLNKVAS KILASGYLDA  180
IKSCQPVGAG NNTNESVINP GIGLKDNIRE TLVPNLTSMS SNNSSTSAQI LNKMATSLPH  240
KVLGLEAAKA VFSKMMESGE KGETTSDGSF VGSDEFGVCL DALSLFEEGP HITTIIGSPS  300
RPTTPMFNNQ VTTPSCFSEN EDSWQCVSSN YVSFTNCAEI SMVESSSSTS CFLFENVDLE  360
TCDDEISKYI QYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74080.1	2e-66	MYB family protein