PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027329477.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 373aa MW: 41242.6 Da PI: 7.7943 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.8 | 5.3e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT +Ed++l+ +++++G+g+W+t +++ g+ R++k+c++rw++yl XP_027329477.1 14 KGAWTVQEDQKLIAYIQKHGTGSWRTLPQKAGLQRCGKSCRLRWFNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.4 | 5.8e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg T+eE+e ++++++ lG++ W++Ia++++ Rt++++k++w++yl XP_027329477.1 67 RGQLTQEEEETIIKLHAVLGNR-WSSIAKHLP-MRTDNEIKNYWNSYL 112 7888******************.*********.*************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 373 aa Download sequence |
MGRTPCCSHE ELRKGAWTVQ EDQKLIAYIQ KHGTGSWRTL PQKAGLQRCG KSCRLRWFNY 60 LRPDIKRGQL TQEEEETIIK LHAVLGNRWS SIAKHLPMRT DNEIKNYWNS YLKKRFEKKC 120 MDPISTVSST ESKSTRLYTV PSKKTSCHGP NATTNQSVSS STKLLNKVAS KILASGYLDA 180 IKSCQPVGAG NNTNESVINP GIGLKDNIRE TLVPNLTSMS SNNSSTSAQI LNKMATSLPH 240 KVLGLEAAKA VFSKMMESGE KGETTSDGSF VGSDEFGVCL DALSLFEEGP HITTIIGSPS 300 RPTTPMFNNQ VTTPSCFSEN EDSWQCVSSN YVSFTNCAEI SMVESSSSTS CFLFENVDLE 360 TCDDEISKYI QYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G74080.1 | 2e-66 | MYB family protein |