PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027329277.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WRKY

Protein Properties

Length: 543aa MW: 58893.3 Da PI: 6.7918

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027329277.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.1e-30	294	352	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_027329277.1 294 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGTHNHP 352 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MDKGWGLALD SSSSFPFFSS PSAAPTPNHN MFNTFGFPAN LSRTATSPSP PSHENRTVVG 60 EVDFFSDRND SSPQHEHINI KKEVSPHHGT PPEFDLHTGL QLLTANAGSD QSTVDDGASS 120 DAENKRAKLA QLQEELRRIN AENQKLKEML SQVNSNYDNL QMRFAMLMQE QQNQRTKNME 180 HEVVQGKVEE TNHGISRGMS RQFLEIGPSS GIGEIDDQVS NSSSDERTRS STPQDNKNEK 240 NKKEIDPDTE SQGWDSNKHH KLNPSNAIDQ STPEATMRKA RVSVRARSEA SMISDGCQWR 300 KYGQKMAKGN PCPRAYYRCT MAVGCPVRKQ VQRCAEDRTI LITTYEGTHN HPLPPAAMAM 360 ASTTAAAASM LLCGSMSSAD GITNPNLLAR AILPCSSSMA TLSASAPFPT VTLDLTHNPN 420 TLQYQKPQVP FQLPFPSQPQ NTGSGPTLAL LPQVIAQTLY SQSKFSGLQL SQDVGSNSQT 480 PRPSSLAETV SATNAAITPD PNFTAALAFA ISSIVGAAHP NNNNNNNSPN VINSATINNF 540 LGN

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MDKGWGLALD SSSSFPFFSS PSAAPTPNHN MFNTFGFPAN LSRTATSPSP PSHENRTVVG  60
EVDFFSDRND SSPQHEHINI KKEVSPHHGT PPEFDLHTGL QLLTANAGSD QSTVDDGASS  120
DAENKRAKLA QLQEELRRIN AENQKLKEML SQVNSNYDNL QMRFAMLMQE QQNQRTKNME  180
HEVVQGKVEE TNHGISRGMS RQFLEIGPSS GIGEIDDQVS NSSSDERTRS STPQDNKNEK  240
NKKEIDPDTE SQGWDSNKHH KLNPSNAIDQ STPEATMRKA RVSVRARSEA SMISDGCQWR  300
KYGQKMAKGN PCPRAYYRCT MAVGCPVRKQ VQRCAEDRTI LITTYEGTHN HPLPPAAMAM  360
ASTTAAAASM LLCGSMSSAD GITNPNLLAR AILPCSSSMA TLSASAPFPT VTLDLTHNPN  420
TLQYQKPQVP FQLPFPSQPQ NTGSGPTLAL LPQVIAQTLY SQSKFSGLQL SQDVGSNSQT  480
PRPSSLAETV SATNAAITPD PNFTAALAFA ISSIVGAAHP NNNNNNNSPN VINSATINNF  540
LGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-123	WRKY family protein