PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027329275.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WRKY

Protein Properties

Length: 546aa MW: 59222.6 Da PI: 6.6754

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027329275.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.1e-30	297	355	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_027329275.1 297 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGTHNHP 355 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MDKGWGLALD SSSSFPFFSS PSAAPTPNHN MFNTFGFPAN LSRTATSPSP PSHENRTVVG 60 EVDFFSDRND SSPQHEHINI KKEVSPHHGT PPEFDLHTGL QLLTANAGSD QSTVDDGASS 120 DAENKRAKVT ELAQLQEELR RINAENQKLK EMLSQVNSNY DNLQMRFAML MQEQQNQRTK 180 NMEHEVVQGK VEETNHGISR GMSRQFLEIG PSSGIGEIDD QVSNSSSDER TRSSTPQDNK 240 NEKNKKEIDP DTESQGWDSN KHHKLNPSNA IDQSTPEATM RKARVSVRAR SEASMISDGC 300 QWRKYGQKMA KGNPCPRAYY RCTMAVGCPV RKQVQRCAED RTILITTYEG THNHPLPPAA 360 MAMASTTAAA ASMLLCGSMS SADGITNPNL LARAILPCSS SMATLSASAP FPTVTLDLTH 420 NPNTLQYQKP QVPFQLPFPS QPQNTGSGPT LALLPQVIAQ TLYSQSKFSG LQLSQDVGSN 480 SQTPRPSSLA ETVSATNAAI TPDPNFTAAL AFAISSIVGA AHPNNNNNNN SPNVINSATI 540 NNFLGN

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MDKGWGLALD SSSSFPFFSS PSAAPTPNHN MFNTFGFPAN LSRTATSPSP PSHENRTVVG  60
EVDFFSDRND SSPQHEHINI KKEVSPHHGT PPEFDLHTGL QLLTANAGSD QSTVDDGASS  120
DAENKRAKVT ELAQLQEELR RINAENQKLK EMLSQVNSNY DNLQMRFAML MQEQQNQRTK  180
NMEHEVVQGK VEETNHGISR GMSRQFLEIG PSSGIGEIDD QVSNSSSDER TRSSTPQDNK  240
NEKNKKEIDP DTESQGWDSN KHHKLNPSNA IDQSTPEATM RKARVSVRAR SEASMISDGC  300
QWRKYGQKMA KGNPCPRAYY RCTMAVGCPV RKQVQRCAED RTILITTYEG THNHPLPPAA  360
MAMASTTAAA ASMLLCGSMS SADGITNPNL LARAILPCSS SMATLSASAP FPTVTLDLTH  420
NPNTLQYQKP QVPFQLPFPS QPQNTGSGPT LALLPQVIAQ TLYSQSKFSG LQLSQDVGSN  480
SQTPRPSSLA ETVSATNAAI TPDPNFTAAL AFAISSIVGA AHPNNNNNNN SPNVINSATI  540
NNFLGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-124	WRKY family protein