PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027329209.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 569aa MW: 62753.7 Da PI: 9.0698

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027329209.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	56.5	5e-18	267	316	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f++Lrel+P++ ++K +Ka+ L +++eYI+ Lq XP_027329209.1 267 RSKHSATEQRRRSKINDRFQTLRELIPHS----DQKRDKASFLLEVIEYIHFLQ 316 889***********************9....9****************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MELPQARPFG TEGRKPTHDF LSLYSNSTAQ QDPRPSSQGS YLKTHDFLQP LERQETKASA 60 KEEATDEISS VAQKPPSSAP PPSVEHLLPG GIGTYSISHI SCFNNNNQRV PKPEAALYTV 120 RQATTSTDRN DDNSNCSSYT SSGFTLWEES SVKRGKTGKE NNVGEKPTLG GTESSAKLGQ 180 WTLTERTSQS FPNNRHSSFS SRSSSQTNGQ KNQSFIEMMK SAKDSAQDEV LENEETFFLK 240 KEPSNTQREL RVKVDGKSTD QKPNTPRSKH SATEQRRRSK INDRFQTLRE LIPHSDQKRD 300 KASFLLEVIE YIHFLQEKVH KYEGSLQGWS NEPEKLMAWQ RNNDKPAAES FQPRGTDSGS 360 CPSPTLLFAS KVDEKNITIT QTIPRGTQNL ESGFNTATTS KTMDHQAGTM NKAFPIPISS 420 QLNFFTPTQI GGPVGIVSQL AHRSASDAEN TKYHPSVECQ TMAATNEKLK EKELAVEGGA 480 ISISSVYSKG LLHTLTHALQ SSGVDLSQAS ISVQIELGKQ ANIRPTVPMS MCGAKDDEVP 540 SNNQKMMRSR VASSGKSDQA VKKLKTCRS

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MELPQARPFG TEGRKPTHDF LSLYSNSTAQ QDPRPSSQGS YLKTHDFLQP LERQETKASA  60
KEEATDEISS VAQKPPSSAP PPSVEHLLPG GIGTYSISHI SCFNNNNQRV PKPEAALYTV  120
RQATTSTDRN DDNSNCSSYT SSGFTLWEES SVKRGKTGKE NNVGEKPTLG GTESSAKLGQ  180
WTLTERTSQS FPNNRHSSFS SRSSSQTNGQ KNQSFIEMMK SAKDSAQDEV LENEETFFLK  240
KEPSNTQREL RVKVDGKSTD QKPNTPRSKH SATEQRRRSK INDRFQTLRE LIPHSDQKRD  300
KASFLLEVIE YIHFLQEKVH KYEGSLQGWS NEPEKLMAWQ RNNDKPAAES FQPRGTDSGS  360
CPSPTLLFAS KVDEKNITIT QTIPRGTQNL ESGFNTATTS KTMDHQAGTM NKAFPIPISS  420
QLNFFTPTQI GGPVGIVSQL AHRSASDAEN TKYHPSVECQ TMAATNEKLK EKELAVEGGA  480
ISISSVYSKG LLHTLTHALQ SSGVDLSQAS ISVQIELGKQ ANIRPTVPMS MCGAKDDEVP  540
SNNQKMMRSR VASSGKSDQA VKKLKTCRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-128	bHLH family protein