PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027329207.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 570aa MW: 62824.8 Da PI: 9.0698

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027329207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	56.5	5e-18	268	317	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f++Lrel+P++ ++K +Ka+ L +++eYI+ Lq XP_027329207.1 268 RSKHSATEQRRRSKINDRFQTLRELIPHS----DQKRDKASFLLEVIEYIHFLQ 317 889***********************9....9****************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence
MELPQARPFG TEGRKPTHDF LSLYSNSTAQ QDPRPSSQGS YLKTHDFLQP LERQETKASA 60 KEEATDEISS VAQKPPSSAP PPSVEHLLPG GIGTYSISHI SCFNNNNQRV PKPEAALYTV 120 RQATTSTDRN DDNSNCSSYT SSGFTLWEES SVKRGKTGKE NNVGEKPTLG GTESSAKLGQ 180 WTLTERTSQS FPNNRHSSFS SRSSSQTNGQ KNQSFIEMMK SAKDSAQDEV LENEETFFLK 240 KEPSNTQRAE LRVKVDGKST DQKPNTPRSK HSATEQRRRS KINDRFQTLR ELIPHSDQKR 300 DKASFLLEVI EYIHFLQEKV HKYEGSLQGW SNEPEKLMAW QRNNDKPAAE SFQPRGTDSG 360 SCPSPTLLFA SKVDEKNITI TQTIPRGTQN LESGFNTATT SKTMDHQAGT MNKAFPIPIS 420 SQLNFFTPTQ IGGPVGIVSQ LAHRSASDAE NTKYHPSVEC QTMAATNEKL KEKELAVEGG 480 AISISSVYSK GLLHTLTHAL QSSGVDLSQA SISVQIELGK QANIRPTVPM SMCGAKDDEV 540 PSNNQKMMRS RVASSGKSDQ AVKKLKTCRS

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence

MELPQARPFG TEGRKPTHDF LSLYSNSTAQ QDPRPSSQGS YLKTHDFLQP LERQETKASA  60
KEEATDEISS VAQKPPSSAP PPSVEHLLPG GIGTYSISHI SCFNNNNQRV PKPEAALYTV  120
RQATTSTDRN DDNSNCSSYT SSGFTLWEES SVKRGKTGKE NNVGEKPTLG GTESSAKLGQ  180
WTLTERTSQS FPNNRHSSFS SRSSSQTNGQ KNQSFIEMMK SAKDSAQDEV LENEETFFLK  240
KEPSNTQRAE LRVKVDGKST DQKPNTPRSK HSATEQRRRS KINDRFQTLR ELIPHSDQKR  300
DKASFLLEVI EYIHFLQEKV HKYEGSLQGW SNEPEKLMAW QRNNDKPAAE SFQPRGTDSG  360
SCPSPTLLFA SKVDEKNITI TQTIPRGTQN LESGFNTATT SKTMDHQAGT MNKAFPIPIS  420
SQLNFFTPTQ IGGPVGIVSQ LAHRSASDAE NTKYHPSVEC QTMAATNEKL KEKELAVEGG  480
AISISSVYSK GLLHTLTHAL QSSGVDLSQA SISVQIELGK QANIRPTVPM SMCGAKDDEV  540
PSNNQKMMRS RVASSGKSDQ AVKKLKTCRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-129	bHLH family protein