PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_Unassigned.978 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 251aa MW: 28288.3 Da PI: 8.0624 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.1 | 8.6e-10 | 114 | 158 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h +rEr+RR+r+ ++++ L ++lP + K +K +i++ A Y+k+L evm.model.AsparagusV1_Unassigned.978 114 HMMRERQRRERLSQSYADLHSMLPYR-----SKGDKNSIVQSAALYVKEL 158 889**********************8.....6999999**********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MDLFSPSSSP PQQEMCPWDF SPELLDFIGA SSDVLSPLSE YSGILSPLSE QPSAVPRSAF 60 VSYTRPEFHD SSDFLSSQAN KKKNIHLRMI DLLRRIPRDR LEARTGEYSP GFRHMMRERQ 120 RRERLSQSYA DLHSMLPYRS KGDKNSIVQS AALYVKELKG VKEELLKRNE ELRIKSVENS 180 SLGGEKIKIR LDPASTLDSM IGALQCLKSM DAKARAIQTE FSGNELMAII NIESKVGSNE 240 LERALMETCR * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 119 | 124 | RQRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43650.1 | 7e-15 | bHLH family protein |