PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_Unassigned.852 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 300aa MW: 33576.1 Da PI: 6.2679 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 57.6 | 2.3e-18 | 46 | 95 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lr+l+P++ ++K +Ka+ L +++eYI+ Lq evm.model.AsparagusV1_Unassigned.852 46 RSKHSATEQRRRSKINDRFQILRDLIPHS----DQKRDKASFLLEVIEYIRFLQ 95 889*************************9....9*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
MEILSRSSEE DEDEYLRREG SSQRGDFTVR FDGKNAEQKQ QLLTPRSKHS ATEQRRRSKI 60 NDRFQILRDL IPHSDQKRDK ASFLLEVIEY IRFLQEKVQK YESYPDMPWV KTFFRSLWKN 120 ARNNTQGAGD GHASGYMYSG NDNNISVAPG MLSNMQNPVE PEVSLQRLLS DSNNAASQSQ 180 WLRPTCPADD TVNNEMLNGQ EELMIDEGTI SVSHSYSQGL LATLTQSLES SGLDLSQASI 240 SVQISLGKRA KRPAATSTSS AKDLDDPSSG NRAMARSMIG SSGEDYEQAS KRHKMHNNS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69010.1 | 5e-52 | bHLH family protein |