PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_Unassigned.852
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 300aa    MW: 33576.1 Da    PI: 6.2679
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_Unassigned.852genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH57.62.3e-184695255
                                          HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                                   HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                                          r +h++ E+rRR++iN++f+ Lr+l+P++    ++K +Ka+ L +++eYI+ Lq
  evm.model.AsparagusV1_Unassigned.852 46 RSKHSATEQRRRSKINDRFQILRDLIPHS----DQKRDKASFLLEVIEYIRFLQ 95
                                          889*************************9....9*******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MEILSRSSEE DEDEYLRREG SSQRGDFTVR FDGKNAEQKQ QLLTPRSKHS ATEQRRRSKI  60
NDRFQILRDL IPHSDQKRDK ASFLLEVIEY IRFLQEKVQK YESYPDMPWV KTFFRSLWKN  120
ARNNTQGAGD GHASGYMYSG NDNNISVAPG MLSNMQNPVE PEVSLQRLLS DSNNAASQSQ  180
WLRPTCPADD TVNNEMLNGQ EELMIDEGTI SVSHSYSQGL LATLTQSLES SGLDLSQASI  240
SVQISLGKRA KRPAATSTSS AKDLDDPSSG NRAMARSMIG SSGEDYEQAS KRHKMHNNS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.15e-52bHLH family protein