PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_Unassigned.849
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 418aa    MW: 45758.9 Da    PI: 7.3259
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_Unassigned.849genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.31.6e-09239287355
                                           HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                                   HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                            +h+ +Er RR+ri +++  L++l+P +    sk   Ka +L + ++Y++sLq
  evm.model.AsparagusV1_Unassigned.849 239 NSHSLAERVRRERISERMKYLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 287
                                           58*************************9....556*****************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    
MSRDHLNHQN SPSDSANWQY GNSSMNMPLP NSSLPMYQGI QMAPSSSCPQ VSMAESFYPN  60
PWNNPNNSVP IGKPIPLSQR LDMGMFLPAN PGVLHPSLSD FPSDSSFIER AAKFSSFSAG  120
NFSALVNPQT SIDHGSRCES PVNNQRDNGS GREETSANVS EDSSSKGLNV KKRKKNSQDM  180
ELDQAQENPK ENVENKQNVE CSSSTPATGK SKGKDAKDST DGAKQDYIHV RARRGQATNS  240
HSLAERVRRE RISERMKYLQ DLVPGCSKVT GKAVMLDEII NYVQSLQRQV EFLSMKLAAV  300
NPSINLNIEA LLSKDIAQTR AGQSPMGFST DLIHPQFLQS QPGSAQAGIH SMMNHADALR  360
RTLNAQFSAL SAFKEPTPQM SNPWDAELQS MVQMNFGNNP APSTQEFNGK PHDGFQL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171175KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.33e-73bHLH family protein