PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | evm.model.AsparagusV1_Unassigned.849 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 418aa MW: 45758.9 Da PI: 7.3259 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.3 | 1.6e-09 | 239 | 287 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L++l+P + sk Ka +L + ++Y++sLq evm.model.AsparagusV1_Unassigned.849 239 NSHSLAERVRRERISERMKYLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 287 58*************************9....556*****************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 418 aa Download sequence |
MSRDHLNHQN SPSDSANWQY GNSSMNMPLP NSSLPMYQGI QMAPSSSCPQ VSMAESFYPN 60 PWNNPNNSVP IGKPIPLSQR LDMGMFLPAN PGVLHPSLSD FPSDSSFIER AAKFSSFSAG 120 NFSALVNPQT SIDHGSRCES PVNNQRDNGS GREETSANVS EDSSSKGLNV KKRKKNSQDM 180 ELDQAQENPK ENVENKQNVE CSSSTPATGK SKGKDAKDST DGAKQDYIHV RARRGQATNS 240 HSLAERVRRE RISERMKYLQ DLVPGCSKVT GKAVMLDEII NYVQSLQRQV EFLSMKLAAV 300 NPSINLNIEA LLSKDIAQTR AGQSPMGFST DLIHPQFLQS QPGSAQAGIH SMMNHADALR 360 RTLNAQFSAL SAFKEPTPQM SNPWDAELQS MVQMNFGNNP APSTQEFNGK PHDGFQL* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 171 | 175 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G68920.3 | 3e-73 | bHLH family protein |