PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_Unassigned.71 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB | ||||||||
Protein Properties | Length: 159aa MW: 18760.1 Da PI: 9.0072 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.7 | 1.3e-13 | 5 | 50 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ a ++G+++W++I++ + ++++kqck rw+ +l evm.model.AsparagusV1_Unassigned.71 5 GVWKNTEDEILKAAAMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 50 78*****************************.************986 PP | |||||||
2 | Myb_DNA-binding | 33.6 | 8.9e-11 | 99 | 142 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l + k++++ W+ Ia +g Rt++qc +r+ k+l evm.model.AsparagusV1_Unassigned.71 99 TEWTREEDEKLFYLAKLMPTQ-WRNIAPIVG--RTPYQCLERYEKLL 142 68*****************99.********8..**********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MIKGGVWKNT EDEILKAAAM KYGKNQWARI SSLLVRKSAK QCKARWYEWL DPSIKIKTAF 60 LRFHLVLCYY CLFSVIFRGK ILIFIGIVEL CLKCWLEKTE WTREEDEKLF YLAKLMPTQW 120 RNIAPIVGRT PYQCLERYEK LLYAVCAKDE NYDANDDP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09770.1 | 3e-67 | MYB family protein |