PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_Unassigned.619 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 279aa MW: 31122.9 Da PI: 4.5606 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30 | 9.4e-10 | 101 | 144 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 Er+RR+r++ ++ eLr l+P+ +K++Ka+i v Y++sLq evm.model.AsparagusV1_Unassigned.619 101 VSERKRRSRMKGKLYELRALVPNI-----TKMDKASIIGDSVVYVQSLQ 144 57*********************7.....7******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MDSQEFVYSS QTHLDTIDGL EPFNDSFVQG FDDFMFSDAG FFDNVFDSDI GLSLDAIVSS 60 PGLNLSLEEE EEEDNHEQNG SKGDYSGSNT KPKRDRSKTL VSERKRRSRM KGKLYELRAL 120 VPNITKMDKA SIIGDSVVYV QSLQDQAKKL TSEISALESS LSSSKEDQAS EVAIDNECCK 180 KNNCGGKILN VMAHEVGEGR CYVRVECNKR DGVASTLYNA MESLQCFLME KSNLSFNCDR 240 FILTLTLNVK KAEEVMTASS MKLQVMSALL KEGFWYQM* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28160.1 | 2e-41 | bHLH family protein |