PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_Unassigned.619
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 279aa    MW: 31122.9 Da    PI: 4.5606
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_Unassigned.619genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH309.4e-10101144755
                                           HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                                   HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                             Er+RR+r++ ++ eLr l+P+      +K++Ka+i    v Y++sLq
  evm.model.AsparagusV1_Unassigned.619 101 VSERKRRSRMKGKLYELRALVPNI-----TKMDKASIIGDSVVYVQSLQ 144
                                           57*********************7.....7******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MDSQEFVYSS QTHLDTIDGL EPFNDSFVQG FDDFMFSDAG FFDNVFDSDI GLSLDAIVSS  60
PGLNLSLEEE EEEDNHEQNG SKGDYSGSNT KPKRDRSKTL VSERKRRSRM KGKLYELRAL  120
VPNITKMDKA SIIGDSVVYV QSLQDQAKKL TSEISALESS LSSSKEDQAS EVAIDNECCK  180
KNNCGGKILN VMAHEVGEGR CYVRVECNKR DGVASTLYNA MESLQCFLME KSNLSFNCDR  240
FILTLTLNVK KAEEVMTASS MKLQVMSALL KEGFWYQM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.12e-41bHLH family protein