PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_Unassigned.559 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB | ||||||||
Protein Properties | Length: 223aa MW: 25615.9 Da PI: 6.6785 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.1 | 1.5e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd+ l+ +++++G g+W++ ++ g+ R++k+c++rw +yl evm.model.AsparagusV1_Unassigned.559 14 KGPWTHEEDLVLISYIQRYGHGNWRALPKQAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 53 | 7.7e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+e ++ ++++lG++ W++Ia++++ gRt++++k+ w+++l evm.model.AsparagusV1_Unassigned.559 67 RGNFSKEEEETIISLHEMLGNR-WSAIAAKLP-GRTDNEIKNVWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MVRAPCCEKM GLKKGPWTHE EDLVLISYIQ RYGHGNWRAL PKQAGLLRCG KSCRLRWINY 60 LRPDIKRGNF SKEEEETIIS LHEMLGNRWS AIAAKLPGRT DNEIKNVWHT HLKKRVKNTN 120 PTIQNSRRKK IKPNPEESPE SSYSDLSIVT RDSINESTKE ENSFEGFPEI DESFWADTLS 180 LNNSKDFGLS DGLEKLNDNG EDMSYWLKVF MESEGSLELP DI* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 113 | 130 | KKRVKNTNPTIQNSRRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 4e-80 | MYB family protein |