PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_Unassigned.559
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB
Protein Properties Length: 223aa    MW: 25615.9 Da    PI: 6.6785
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_Unassigned.559genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.11.5e-161461148
                                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
                       Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                                          +g+WT eEd+ l+ +++++G g+W++ ++  g+ R++k+c++rw +yl
  evm.model.AsparagusV1_Unassigned.559 14 KGPWTHEEDLVLISYIQRYGHGNWRALPKQAGLLRCGKSCRLRWINYL 61
                                          79******************************99************97 PP

2Myb_DNA-binding537.7e-1767112148
                                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
                       Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                                           rg++++eE+e ++ ++++lG++ W++Ia++++ gRt++++k+ w+++l
  evm.model.AsparagusV1_Unassigned.559  67 RGNFSKEEEETIISLHEMLGNR-WSAIAAKLP-GRTDNEIKNVWHTHL 112
                                           89********************.*********.************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MVRAPCCEKM GLKKGPWTHE EDLVLISYIQ RYGHGNWRAL PKQAGLLRCG KSCRLRWINY  60
LRPDIKRGNF SKEEEETIIS LHEMLGNRWS AIAAKLPGRT DNEIKNVWHT HLKKRVKNTN  120
PTIQNSRRKK IKPNPEESPE SSYSDLSIVT RDSINESTKE ENSFEGFPEI DESFWADTLS  180
LNNSKDFGLS DGLEKLNDNG EDMSYWLKVF MESEGSLELP DI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113130KKRVKNTNPTIQNSRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.14e-80MYB family protein