PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_Unassigned.211

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

HB-other

Protein Properties

Length: 1148aa MW: 129810 Da PI: 8.9844

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_Unassigned.211	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	44.6	2.5e-14	18	67	8	57
-HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 t+ ql+ Le+++ +++yp++e++ee A+ l+Lt +qV++WF rR kek+ evm.model.AsparagusV1_Unassigned.211 18 TPFQLDLLEKYYSEEKYPKQEAMEEYAALLNLTYKQVRTWFAERRRKEKR 67 899**********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1148 aa Download sequence
MRNDTTSSRK DHGTKKKTPF QLDLLEKYYS EEKYPKQEAM EEYAALLNLT YKQVRTWFAE 60 RRRKEKREME ARGKPDCNAI KWKFNRIANE GQPTSQKKCR SLPIKAQVKH NTPSDCCRVC 120 DPKSVKFKRK YGVISSDNLP VGQKNHRFHQ RVLFSKEYIL KKVFRKDGPP LGVEFDSLPA 180 SSFCFHKDSG LLRSDWNFQG VPKRRKILAS PTVKPGPVQV QTNPCKNYGI GKGLMTAWRA 240 TNPDNARLPS KFNFVDGGAT MPFKSAIKER PRRSSGGGQQ NQSNQRKKFQ EARRPVMKKR 300 KVPSGKGERP RTVCRLLNDA PKFLEQSNLS RRLLDDEELE LRELQTGSTS SRCSVHFASN 360 GSHGCPLCKD LLAEFPPQIV KMRQPLSRRP WDSSPELVKK LFKIFRFLYG NAATIKICPY 420 TLDDLAHAFT DKDSMLLGKI HVALLELFLL DVQRALTAGL IPRASKDHRF LSFLHFVREQ 480 ECDMNIWNQF LNPLTWTEVL RQVLVAAGFG LKSNTARTAM FNKERNQMEK YGLRSRTLKG 540 ELFAILSEQG NGGLTVCELA KAPQVVALDL PNTNKEVEEQ ICLTLSSDIT LFEKIAPSAY 600 RLRIGPDIKG KEGHQSDSDD SGSVDDNFSA SSSNDESDAS EELNSTGQRT KRYKRRCKRT 660 GQQLTEYTEI DESYSGEAWV LGLMEGEYSD LSINEKLDVL IALLDLAGAA SVYRMEESGK 720 TLPATMPNSW CHGSGAKIKK SSTRSHQQDL EIISGASKGV KTSIANGTEA EDKSQPDIHQ 780 VQSVHLGYDR RYNSYWLFLG PCDAHDPGHR RVYFESSEDG HWKVIDTAQA FDALLSSLDC 840 RGTREAHLFA SLDKRANSLC QAMDDWMTNE FTGRQERGCY STEFDSNSGD GSSAVSDVDN 900 ISRSLEPIDR AASGGMVLEL GKTRREEKQK WDRLQAFDKW VWNGFYSHLN AIKRTKRSYM 960 ETLTRCQSCH DLYLRDEKHC RICHLTFELD FDLEEKYAVH VATCRTKEDS CEFPKHKVLP 1020 SQLQALKAAI HAIEACMPEA ALSAAWTRSA HNLWVKRLQR TSSLPELLQV VTDFVGVINE 1080 EWLYGCASKL GSHAALDDII VCFQTMPQTT SAVALWMVKL DALIAPCFGK AQPQQAECRP 1140 QLRGRPS*

Sequence ? help Back to Top

Protein Sequence Length: 1148 aa Download sequence

MRNDTTSSRK DHGTKKKTPF QLDLLEKYYS EEKYPKQEAM EEYAALLNLT YKQVRTWFAE  60
RRRKEKREME ARGKPDCNAI KWKFNRIANE GQPTSQKKCR SLPIKAQVKH NTPSDCCRVC  120
DPKSVKFKRK YGVISSDNLP VGQKNHRFHQ RVLFSKEYIL KKVFRKDGPP LGVEFDSLPA  180
SSFCFHKDSG LLRSDWNFQG VPKRRKILAS PTVKPGPVQV QTNPCKNYGI GKGLMTAWRA  240
TNPDNARLPS KFNFVDGGAT MPFKSAIKER PRRSSGGGQQ NQSNQRKKFQ EARRPVMKKR  300
KVPSGKGERP RTVCRLLNDA PKFLEQSNLS RRLLDDEELE LRELQTGSTS SRCSVHFASN  360
GSHGCPLCKD LLAEFPPQIV KMRQPLSRRP WDSSPELVKK LFKIFRFLYG NAATIKICPY  420
TLDDLAHAFT DKDSMLLGKI HVALLELFLL DVQRALTAGL IPRASKDHRF LSFLHFVREQ  480
ECDMNIWNQF LNPLTWTEVL RQVLVAAGFG LKSNTARTAM FNKERNQMEK YGLRSRTLKG  540
ELFAILSEQG NGGLTVCELA KAPQVVALDL PNTNKEVEEQ ICLTLSSDIT LFEKIAPSAY  600
RLRIGPDIKG KEGHQSDSDD SGSVDDNFSA SSSNDESDAS EELNSTGQRT KRYKRRCKRT  660
GQQLTEYTEI DESYSGEAWV LGLMEGEYSD LSINEKLDVL IALLDLAGAA SVYRMEESGK  720
TLPATMPNSW CHGSGAKIKK SSTRSHQQDL EIISGASKGV KTSIANGTEA EDKSQPDIHQ  780
VQSVHLGYDR RYNSYWLFLG PCDAHDPGHR RVYFESSEDG HWKVIDTAQA FDALLSSLDC  840
RGTREAHLFA SLDKRANSLC QAMDDWMTNE FTGRQERGCY STEFDSNSGD GSSAVSDVDN  900
ISRSLEPIDR AASGGMVLEL GKTRREEKQK WDRLQAFDKW VWNGFYSHLN AIKRTKRSYM  960
ETLTRCQSCH DLYLRDEKHC RICHLTFELD FDLEEKYAVH VATCRTKEDS CEFPKHKVLP  1020
SQLQALKAAI HAIEACMPEA ALSAAWTRSA HNLWVKRLQR TSSLPELLQV VTDFVGVINE  1080
EWLYGCASKL GSHAALDDII VCFQTMPQTT SAVALWMVKL DALIAPCFGK AQPQQAECRP  1140
QLRGRPS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	61	66	RRRKEK
2	61	68	RRRKEKRE
3	286	301	RKKFQEARRPVMKKRK
4	651	659	KRYKRRCKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-146	HB-other family protein