PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_Unassigned.1171

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

TALE

Protein Properties

Length: 515aa MW: 56408.3 Da PI: 8.1172

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_Unassigned.1171	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.9	9.9e-10	330	367	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gLt +qV++WF N R + evm.model.AsparagusV1_Unassigned.1171 330 FEHflHPYPTDTDKHMLATQTGLTRNQVSNWFINARVR 367 554459******************************88 PP
2	BELL	107.3	9.5e-35	184	254	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + e+q++k+kLl l+eeV++rYkqy++q+q+v+ssFe vagl +a+pYtslAlkaiS++Fr++k ai++q+ evm.model.AsparagusV1_Unassigned.1171 184 QPEIQQRKVKLLYLQEEVCRRYKQYHQQMQMVVSSFESVAGLSAATPYTSLALKAISKQFRSIKHAISNQL 254 5699****************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MSSSQRAAAA AASSCFSHLN VEDNKVAANE TQGLSLSLAS KPLVELHMPS SQGQISPPAA 60 KLLMMDPRRS VGPLGPFTGY ATILKSSKFL SPAQQLLDEF CSAVTGAKAT KQEQYGHDHR 120 NRNMSFVGVG GSGSGSHCDD GSNYRVKGGN SVASSSSFHN SMEVGSASEG GAGVGSGSSC 180 SIEQPEIQQR KVKLLYLQEE VCRRYKQYHQ QMQMVVSSFE SVAGLSAATP YTSLALKAIS 240 KQFRSIKHAI SNQLRHMSRI LGEDFISSPS SSSRGETTMT PQLKYLDQSL RRQKASENAS 300 LSFLDNNQPV WRPQRGLPER AVSVLRAWLF EHFLHPYPTD TDKHMLATQT GLTRNQVSNW 360 FINARVRLWK PMVEEIHMLE SKGMAEMDLN SSNKNDRKSI MDNIRGQPLS DQGSESQSNK 420 KFDCSSMDPI AHDSSSISNM EQWHREKRSR MEECTVAGGI DGGLMSFGYQ GGMMDVGGLG 480 SVSLTLGLQH NEDAQQQEQQ MRHFGSHMLH DFVG*

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MSSSQRAAAA AASSCFSHLN VEDNKVAANE TQGLSLSLAS KPLVELHMPS SQGQISPPAA  60
KLLMMDPRRS VGPLGPFTGY ATILKSSKFL SPAQQLLDEF CSAVTGAKAT KQEQYGHDHR  120
NRNMSFVGVG GSGSGSHCDD GSNYRVKGGN SVASSSSFHN SMEVGSASEG GAGVGSGSSC  180
SIEQPEIQQR KVKLLYLQEE VCRRYKQYHQ QMQMVVSSFE SVAGLSAATP YTSLALKAIS  240
KQFRSIKHAI SNQLRHMSRI LGEDFISSPS SSSRGETTMT PQLKYLDQSL RRQKASENAS  300
LSFLDNNQPV WRPQRGLPER AVSVLRAWLF EHFLHPYPTD TDKHMLATQT GLTRNQVSNW  360
FINARVRLWK PMVEEIHMLE SKGMAEMDLN SSNKNDRKSI MDNIRGQPLS DQGSESQSNK  420
KFDCSSMDPI AHDSSSISNM EQWHREKRSR MEECTVAGGI DGGLMSFGYQ GGMMDVGGLG  480
SVSLTLGLQH NEDAQQQEQQ MRHFGSHMLH DFVG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34610.2	2e-69	TALE family protein