PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_Unassigned.1052 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | SBP | ||||||||
Protein Properties | Length: 256aa MW: 27935.4 Da PI: 9.3478 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 135.3 | 1.9e-42 | 42 | 119 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT----- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhner 72 +CqvegC++dls ak y+ rhkvC +hsk+p+vlv+gleqrfCqqCsrfh+l efD++krsCrrrLa+hner evm.model.AsparagusV1_Unassigned.1052 42 RCQVEGCSVDLSGAKAYYGRHKVCGMHSKSPMVLVAGLEQRFCQQCSRFHQLPEFDQDKRSCRRRLAGHNER 113 6*********************************************************************** PP --S--- CS SBP 73 rrkkqa 78 rrk+q+ evm.model.AsparagusV1_Unassigned.1052 114 RRKPQH 119 ***986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MEMGSSSLQI STTESLNGLK LRSSSSSSSS SSSKSLTKQP PRCQVEGCSV DLSGAKAYYG 60 RHKVCGMHSK SPMVLVAGLE QRFCQQCSRF HQLPEFDQDK RSCRRRLAGH NERRRKPQHS 120 SLASQMPSSP SDDGNSRWGG FLMNFAYPQL AGIMASDQTT SRKWQGGTQL PASEGPGVFS 180 LLSAQPRGNS LTGNPTPTDS TSTIFDGAPI ISFDGKSHPL DFKAPEALEL MWMPNELKQA 240 LERKRQFMQL DDVGN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42200.1 | 1e-43 | SBP family protein |