PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.97
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HD-ZIP
Protein Properties Length: 816aa    MW: 89262.7 Da    PI: 6.3446
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.97genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.48e-21126181156
                                  TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                     Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                                  r++ +++t+ q++e+e+lF+++++p+ ++r++L++ lgLt rqVk+WFqNrR+++k
  evm.model.AsparagusV1_10.97 126 RKRHHRHTARQIKEMEALFKECPHPDDKQRQRLSQDLGLTPRQVKFWFQNRRTQMK 181
                                  5667899**********************************************998 PP

2START128.57.9e-4134754426206
                                  EXCCTTEEEEEEESSS..........SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECTT...... CS
                        START  26 esengdevlqkfeeskv.........dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevissg...... 88 
                                  e +n +e++++f              ++ e  r+sg+v m++++lv  +ld + +W e +     ka tl+ issg      
  evm.model.AsparagusV1_10.97 347 EVLNVEEYRKSFHW--PvelkqesgeFRNEGTRDSGLVMMNSVTLVDVFLDAN-KWMELFSsivsKARTLQIISSGischgn 425
                                  55555666666522..1234555555677889*********************.99999999999***************** PP

                                  EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE CS
                        START  89 galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwve 168
                                  g l+lm+aelq+lsplvp R+  f+Ry+    ++g+w+ivd  +d   +   + ++ R +++pSg++i++++ng+ +v wve
  evm.model.AsparagusV1_10.97 426 GSLHLMYAELQVLSPLVPtREAHFLRYCHHnAEEGTWTIVDFPIDRLHNGF-DIPLPRYRRRPSGCIIQDMPNGYARVMWVE 506
                                  ******************************9******************99.99**************************** PP

                                  -EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
                        START 169 hvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                                  h++ +++ +h+++ +lv+sg+a+ga +w++ lqrqce+
  evm.model.AsparagusV1_10.97 507 HAEIEDKPVHNVFDQLVSSGVAFGATRWLSILQRQCEC 544
                                  ************************************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 816 aa     Download sequence    
MSTARALEEG APSSASRSDG DDRHCLQDAD GILTSRREAR GRSRGHSASM SAVASADTTA  60
ARRAHATIDE KPEASSLYFP SFLVFSSKEE EVEMAATTGG SKEEETESCH ADGTCGGEVA  120
GEEGKRKRHH RHTARQIKEM EALFKECPHP DDKQRQRLSQ DLGLTPRQVK FWFQNRRTQM  180
KSQQDRAENV ILRGENESLR SENFRLRSMM RDVRCRSCGG PAVLGEMPCG GDRHLRLENA  240
QLKDELQHLS CIVDADPLLA LSPAPLLMLP SPDPDMSIYS RHLGELQMVP VHTITKNHPK  300
LGGPIIMDQD QGPAMELATT ASEHLKRLCS IGEPLWINNN NFGGIVEVLN VEEYRKSFHW  360
PVELKQESGE FRNEGTRDSG LVMMNSVTLV DVFLDANKWM ELFSSIVSKA RTLQIISSGI  420
SCHGNGSLHL MYAELQVLSP LVPTREAHFL RYCHHNAEEG TWTIVDFPID RLHNGFDIPL  480
PRYRRRPSGC IIQDMPNGYA RVMWVEHAEI EDKPVHNVFD QLVSSGVAFG ATRWLSILQR  540
QCECHASLMV RKIPDLGVIP SADARMNFMK LSQRMVKIFC SNISSASNQS WAALSESSDD  600
ITRVKTQKNI EPGQPTGVIL TAVSTAWLPF SHQQVFDLLA NEQRRSQLDV LSSGSSYHEV  660
AHIANGSYQK NCVSLLRINA PSNSSSVEPL LQESSTHDSG GSIIVYAAID VHGVQVAMSG  720
EDTSFIPLLP TGFVLLPAPS QISPSDENVD GSVIGCLLTV GVQVLASTVP SAKLDLSSAS  780
SISAHLRSAL RQISAALGGG GSGGGARADS EPESA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein