PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.761
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB
Protein Properties Length: 316aa    MW: 35709.2 Da    PI: 4.8168
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.761genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.43.2e-132267146
                                  TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                                  +g+W +eEde l+++v+++G+++W++I ++  + Rt+k+c++rw +
  evm.model.AsparagusV1_10.761 22 KGPWMAEEDEVLLEYVRRHGPRDWSSIRSKGLLPRTGKSCRLRWVN 67
                                  79*************************8876677**********87 PP

2Myb_DNA-binding44.73e-1478118345
                                   SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
               Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                                   ++++eE+ + +++ +++G++ W++Ia +++ gRt++++k++w 
  evm.model.AsparagusV1_10.761  78 KFSPEEERIVIELQARFGNK-WARIATYLP-GRTDNDVKNFWS 118
                                   79******************.*********.***********5 PP

Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MQGAAKVSSR RVNDQCGTIT RKGPWMAEED EVLLEYVRRH GPRDWSSIRS KGLLPRTGKS  60
CRLRWVNKLQ PNLKTGCKFS PEEERIVIEL QARFGNKWAR IATYLPGRTD NDVKNFWSTR  120
QKRLARMLQI PLPSKSNKNQ SKMPLTNDPP TFEVASLDLI PSEEESVESN QLSYVDSNRE  180
QQSLHQMPAD NHVLNPSTMP LLEPQLNWEP PQLQLENLPN PELDFPLLLE GSDRLIQQFE  240
DTGFEDNSSF LQITENMPFL GLGDGTSSVK IDEGHSAGAP DSFFDDFPVD MFDFMEQPQP  300
LPTPPGACGS LLCQR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.16e-64MYB family protein