PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.376
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 306aa    MW: 34036.8 Da    PI: 9.7067
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.376genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.14.1e-08248291243
                                   SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHH CS
               Myb_DNA-binding   2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksr 43 
                                   g+W+  Ed  l++a k ++++   +W+++a+ ++ gR+  +c+ r
  evm.model.AsparagusV1_10.376 248 GKWSSGEDIALLNALKAFPKEvamRWEKVAAAVP-GRSKAECVKR 291
                                   89********************************.*******987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MEFMEEESRP RFLFQSRPSS STSSPQRTPA QKPSALRVLS CFSLSLLLLF ILFISSSLQS  60
SQTLTFLLLW ISLSLLVAPF APSSVTGGDA QSAAGTPLHP PPPTQTDGRA PAPSRRSRSR  120
RPYSSNPNPN PNPLPKPEDP TSNVTRSGKV EAFEEEEEEE EEELEWTDED LQILKKQILK  180
HPVGEPRRWE KISEAFGRRH GLESVIKMGK SMAERKPEEK DSFAKFLKQR KPLDKRVEGV  240
DAEVKEGGKW SSGEDIALLN ALKAFPKEVA MRWEKVAAAV PGRSKAECVK RVAELKKDFR  300
SSKAA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45420.19e-54MYB_related family protein